RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GNAT3A8MTJ3 354 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 ADGRB2O60241 1585 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 FBXO24O75426 580 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 LRIG2O94898 1065 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 CAP2P40123 477 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 PCNX4Q63HM2 1172 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 ARMCX6Q7L4S7 300 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF507Q8TCN5 953 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 CRELD1Q96HD1 420 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 C12orf49Q9H741 205 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 PRDM5Q9NQX1 630 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 LMCD1Q9NZU5 365 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 NCOA3Q9Y6Q9 1424 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 PITPNM2Q9BZ72 1349 aa6.46□□□□□ -1.38
ATPAF1-203ENST00000460928 DCCP43146 1447 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 ZP2Q05996 745 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 IKZF1Q13422 519 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 CYFIP1Q7L576 1253 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 ELMO3Q96BJ8 720 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 FOXQ1Q9C009 403 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 CAPN10Q9HC96 672 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 EVC2Q86UK5 1308 aa6.45□□□□□ -1.38
ATPAF1-203ENST00000460928 EIF3AQ14152 1382 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 PPIP5K1Q6PFW1 1433 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 CELA3AP09093 270 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 CNGB1Q14028 1251 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 SV2BQ7L1I2 683 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 KRT28Q7Z3Y7 464 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 ZSWIM9Q86XI8 627 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 SLC43A3Q8NBI5 491 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 NGDNQ8NEJ9 315 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 BHLHE22Q8NFJ8 381 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 ACBD3Q9H3P7 528 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 FAM53CQ9NYF3 392 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 ACEP12821 1306 aa6.44□□□□□ -1.38
ATPAF1-203ENST00000460928 TOPAZ1Q8N9V7 1692 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 BCL9LQ86UU0 1499 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 USP17L7P0C7H9 530 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF865P0CJ78 1059 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 MESP2Q0VG99 397 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 SLBPQ14493 270 aaKnown RBP eCLIP6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 INPP5AQ14642 412 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 LRFN4Q6PJG9 635 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 HDXQ7Z353 690 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 GAL3ST3Q96A11 431 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 TANGO6Q9C0B7 1094 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 PRDM7Q9NQW5 492 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 USP31Q70CQ4 1352 aa6.43□□□□□ -1.38
ATPAF1-203ENST00000460928 BLMP54132 1417 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 PXDNQ92626 1479 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 CD163L1Q9NR16 1453 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 SLITRK5O94991 958 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 FBLN1P23142 703 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 GNL2Q13823 731 aaKnown RBP6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 PKN1Q16512 942 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 KSR1Q8IVT5 923 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 MFSD2AQ8NA29 543 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 PLPPR2Q96GM1 343 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 FAM84AQ96KN4 292 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 WNT10AQ9GZT5 417 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 FBRSQ9HAH7 460 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 SEMA3GQ9NS98 782 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 SNCAIPQ9Y6H5 919 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 KIF7Q2M1P5 1343 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 WASHC2AQ641Q2 1341 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 AHDC1Q5TGY3 1603 aaPredicted RBP6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 SBNO2Q9Y2G9 1366 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 ANKARQ7Z5J8 1434 aa6.42□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF503-AS2A6NEH8 195 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 TNNI2P48788 182 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 RACK1P63244 317 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 TMF1P82094 1093 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 PTPN11Q06124 597 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 TAF1CQ15572 869 aaPredicted RBP6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF124Q15973 351 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF394Q53GI3 561 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 HS2ST1Q7LGA3 356 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 DEFB132Q7Z7B7 95 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 NME9Q86XW9 330 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 ZNF654Q8IZM8 581 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 SLC38A3Q99624 504 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 DDX41Q9UJV9 622 aaKnown RBP6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 MYOM1P52179 1685 aa6.41□□□□□ -1.38
ATPAF1-203ENST00000460928 ITSN1Q15811 1721 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 TRPM3Q9HCF6 1732 aaPredicted RBP6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 PRAMEF27A3QJZ7 478 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 LRRC10BA6NIK2 292 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 AFMP43652 599 aa6.4□□□□□ -1.38
ATPAF1-203ENST00000460928 RPS26P62854 115 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms