RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 CCDC17Q96LX7 622 aa16.26■□□□□ 0.19
SCAMP4-206ENST00000460767 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 GBF1Q92538 1859 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 DUSP11O75319 330 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 SDSP20132 328 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 PBX2P40425 430 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 ADGRE1Q14246 886 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 ALX1Q15699 326 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 CCDC129Q6ZRS4 1044 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 CENPQQ7L2Z9 268 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 TMEM199Q8N511 208 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 GLT1D1Q96MS3 346 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 UPF3AQ9H1J1 476 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 PRDM12Q9H4Q4 367 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 FAM184BQ9ULE4 1060 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 PPP1R9AQ9ULJ8 1098 aa16.25■□□□□ 0.19
SCAMP4-206ENST00000460767 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 VWA5AO00534 786 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 PGK2P07205 417 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 STAT3P40763 770 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 CDK8P49336 464 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 NMIQ13287 307 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 FAM126BQ8IXS8 530 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 PCSK9Q8NBP7 692 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 HERVK_113Q902F9 699 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 LENG1Q96BZ8 264 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 C1QTNF1Q9BXJ1 281 aa16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 CXXC1Q9P0U4 656 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-206ENST00000460767 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 FGRP09769 529 aa16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 CSF2RAP15509 400 aa16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 KCNA10Q16322 511 aa16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 MTIF3Q9H2K0 278 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 RAPGEFL1Q9UHV5 662 aa16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
SCAMP4-206ENST00000460767 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 ARVCFO00192 962 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 SNAI1O95863 264 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 AKR1B1P15121 316 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 GJA9P57773 515 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 TEX13BQ9BXU2 312 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 IL25Q9H293 177 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 IL23AQ9NPF7 189 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 MSRAQ9UJ68 235 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
SCAMP4-206ENST00000460767 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 IGKV6D-41A0A0C4DH26 115 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 MYADML2A6NDP7 307 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 GRXCR1A8MXD5 290 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 CD4P01730 458 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 RASA1P20936 1047 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 ZNF365Q70YC5 407 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 CLEC10AQ8IUN9 316 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 KANSL2Q9H9L4 492 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 PLIN4Q96Q06 1357 aa16.21■□□□□ 0.19
SCAMP4-206ENST00000460767 ASGR1P07306 291 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 HSPD1P10809 573 aaKnown RBP16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 BMP1P13497 986 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 SLC43A3Q8NBI5 491 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 PPM1EQ8WY54 764 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 GOPCQ9HD26 462 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 FBXO28Q9NVF7 368 aa16.2■□□□□ 0.18
SCAMP4-206ENST00000460767 LRRC37A2A6NM11 1700 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 NCOR1O75376 2440 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 HIP1O00291 1037 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 FGAP02671 866 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 EEF2P13639 858 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 PPARAQ07869 468 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 AAK1Q2M2I8 961 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 AMOTL1Q8IY63 956 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 NACAP1Q9BZK3 213 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 SLC28A3Q9HAS3 691 aa16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 ZHX1Q9UKY1 873 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-206ENST00000460767 CTAGE5O15320 804 aa16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 ADCY6O43306 1168 aa16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 POU3F3P20264 500 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-206ENST00000460767 NOVP48745 357 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms