RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ATP2B1P20020 1258 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 PICALMQ13492 652 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 NOM1Q5C9Z4 860 aaKnown RBP19.26■□□□□ 0.67
YIPF3-205ENST00000460547 NT5DC1Q5TFE4 455 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 WWC2Q6AWC2 1192 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 CYP4F22Q6NT55 531 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 HHIPL1Q96JK4 782 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 MTMR4Q9NYA4 1195 aa19.26■□□□□ 0.67
YIPF3-205ENST00000460547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.25■□□□□ 0.67
YIPF3-205ENST00000460547 WNT7AO00755 349 aa19.25■□□□□ 0.67
YIPF3-205ENST00000460547 ACTN4O43707 911 aaKnown RBP19.25■□□□□ 0.67
YIPF3-205ENST00000460547 OFD1O75665 1012 aa19.25■□□□□ 0.67
YIPF3-205ENST00000460547 PNOCQ13519 176 aa19.25■□□□□ 0.67
YIPF3-205ENST00000460547 PIK3AP1Q6ZUJ8 805 aa19.25■□□□□ 0.67
YIPF3-205ENST00000460547 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
YIPF3-205ENST00000460547 CAPNS2Q96L46 248 aa19.25■□□□□ 0.67
YIPF3-205ENST00000460547 DEFB129Q9H1M3 183 aa19.25■□□□□ 0.67
YIPF3-205ENST00000460547 SMTNL1A8MU46 457 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 POLR2DO15514 142 aaKnown RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 HLA-DOAP06340 250 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 POSTNQ15063 836 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 SPECC1Q5M775 1068 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TYW1BQ6NUM6 668 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 CCDC12Q8WUD4 166 aaPredicted RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 PIBF1Q8WXW3 757 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TDRD3Q9H7E2 651 aaKnown RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 POLR2AP24928 1970 aaKnown RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 hCG_1984214I3L0E3 225 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 BIN1O00499 593 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 FKBP1BP68106 108 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TNFAIP1Q13829 316 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 ARL6IP4Q66PJ3 421 aaKnown RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 ZNF713Q8N859 430 aaPredicted RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TRIML1Q8N9V2 468 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 SPC24Q8NBT2 197 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 CCDC34Q96HJ3 373 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 TTC12Q9H892 705 aaPredicted RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 ZNF70Q9UC06 446 aaPredicted RBP19.24■□□□□ 0.67
YIPF3-205ENST00000460547 PCDHA5Q9Y5H7 936 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 PPP2R3BQ9Y5P8 575 aa19.24■□□□□ 0.67
YIPF3-205ENST00000460547 AKR1B1P15121 316 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 SHMT1P34896 483 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 TPM4P67936 248 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 PTGDRQ13258 359 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 NCAPHQ15003 741 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 ZNF174Q15697 407 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 FOXP4Q8IVH2 680 aaPredicted RBP19.23■□□□□ 0.67
YIPF3-205ENST00000460547 IDI2Q9BXS1 227 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 ZMYND12Q9H0C1 365 aa19.23■□□□□ 0.67
YIPF3-205ENST00000460547 PDHBP11177 359 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 SARSP49591 514 aaKnown RBP19.22■□□□□ 0.67
YIPF3-205ENST00000460547 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 RGMBQ6NW40 437 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 SPATA20Q8TB22 786 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
YIPF3-205ENST00000460547 CCDC17Q96LX7 622 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 PYM1Q9BRP8 204 aaKnown RBP19.22■□□□□ 0.67
YIPF3-205ENST00000460547 DHX36Q9H2U1 1008 aaKnown RBP19.22■□□□□ 0.67
YIPF3-205ENST00000460547 KCNF1Q9H3M0 494 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 RIOX1Q9H6W3 641 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 SERTAD1Q9UHV2 236 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 MYH8P13535 1937 aa19.22■□□□□ 0.67
YIPF3-205ENST00000460547 COL2A1P02458 1487 aaPredicted RBP19.21■□□□□ 0.67
YIPF3-205ENST00000460547 ESYT2A0FGR8 921 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 ADAMTS3O15072 1205 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 SLFN14P0C7P3 912 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 GOLGA8HP0CJ92 632 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 TNNI2P48788 182 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 USP17L2Q6R6M4 530 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 USP49Q70CQ1 688 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 SH3RF1Q7Z6J0 888 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 SYMPKQ92797 1274 aaKnown RBP19.21■□□□□ 0.67
YIPF3-205ENST00000460547 TMOD2Q9NZR1 351 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
YIPF3-205ENST00000460547 CCDC194A0A1B0GVG4 234 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 TTLL1O95922 423 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 ZNF157P51786 506 aaPredicted RBP19.2■□□□□ 0.66
YIPF3-205ENST00000460547 MYL5Q02045 173 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 SUPT20HL1Q3ZLR7 823 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 C4orf32Q8N8J7 132 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 ZNF830Q96NB3 372 aaPredicted RBP19.2■□□□□ 0.66
YIPF3-205ENST00000460547 PCDHA6Q9UN73 950 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 PCDHA8Q9Y5H6 950 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 SIPA1L1O43166 1804 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 TCP10L2B9ZVM9 353 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 HSPA1AP0DMV8 641 aaKnown RBP19.2■□□□□ 0.66
YIPF3-205ENST00000460547 HSPA1BP0DMV9 641 aaKnown RBP19.2■□□□□ 0.66
YIPF3-205ENST00000460547 PTGS1P23219 599 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 MAP2K2P36507 400 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 NFIAQ12857 509 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 PRKG1Q13976 671 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 RASA3Q14644 834 aa19.2■□□□□ 0.66
YIPF3-205ENST00000460547 RASGRP2Q7LDG7 609 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms