RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 EMILIN3Q9NT22 766 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
ABCA4-202ENST00000460514 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
ABCA4-202ENST00000460514 PNMA2Q9UL42 364 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 AGTPBP1Q9UPW5 1226 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 SLC45A1Q9Y2W3 748 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 CTDP1Q9Y5B0 961 aaPredicted RBP8.82□□□□□ -1
ABCA4-202ENST00000460514 MYPNQ86TC9 1320 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 PALM3A6NDB9 673 aaPredicted RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 TMEM232C9JQI7 657 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 KLRF2D3W0D1 207 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 HSP90AA1P07900 732 aaKnown RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 HSPA6P17066 643 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 HOXA7P31268 230 aaPredicted RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 CCT2P78371 535 aaKnown RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 IRX3P78415 501 aaPredicted RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 AKAP17AQ02040 695 aaKnown RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 TRAF1Q13077 416 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 STK3Q13188 491 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 ME3Q16798 604 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 FAM83BQ5T0W9 1011 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 KCTD1Q719H9 257 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 ANKRD23Q86SG2 305 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 CCDC144CPQ8IYA2 1237 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 TRIM22Q8IYM9 498 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 PRPF38AQ8NAV1 312 aaKnown RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 GTF3C6Q969F1 213 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 TMX3Q96JJ7 454 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 CAPNS2Q96L46 248 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 SLF1Q9BQI6 1058 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 HOXC10Q9NYD6 342 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 MAD2L2Q9UI95 211 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 KIF3AQ9Y496 699 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.81□□□□□ -1
ABCA4-202ENST00000460514 PTPRFP10586 1907 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 LOC285556D6RIA3 1793 aa8.81□□□□□ -1
ABCA4-202ENST00000460514 FRMPD2Q68DX3 1309 aaPredicted RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 TESPA1A2RU30 521 aaPredicted RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 FAM155AB1AL88 458 aaPredicted RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 GFRA3O60609 400 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 FLOT1O75955 427 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 ALDH1A1P00352 501 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 RXRAP19793 462 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 MAP2K2P36507 400 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 HMGN5P82970 282 aaKnown RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 PLCB2Q00722 1185 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 GRM1Q13255 1194 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 COG2Q14746 738 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 SYDE2Q5VT97 1194 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 CYP4F22Q6NT55 531 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 BTNL9Q6UXG8 535 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 THSD4Q6ZMP0 1018 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 CATSPERGQ6ZRH7 1159 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 TMTC3Q6ZXV5 915 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 RAB11FIP4Q86YS3 637 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 MB21D1Q8N884 522 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 WASF1Q92558 559 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 PARK7Q99497 189 aaKnown RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 NUP88Q99567 741 aaPredicted RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 LLPHQ9BRT6 129 aaKnown RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 SPZ1Q9BXG8 430 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 SEC63Q9UGP8 760 aaKnown RBP8.8□□□□□ -1
ABCA4-202ENST00000460514 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
ABCA4-202ENST00000460514 ZBED4O75132 1171 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 GOLGA8HP0CJ92 632 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 IFNAR1P17181 557 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 ADD1P35611 737 aaKnown RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 TM4SF4P48230 202 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 KIF23Q02241 960 aaPredicted RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 SCRN1Q12765 414 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 KIAA1755Q5JYT7 1200 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 CCDC83Q8IWF9 413 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 STAG2Q8N3U4 1231 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 TMC2Q8TDI7 906 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 BRI3BPQ8WY22 251 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 KIFC2Q96AC6 838 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 RRP36Q96EU6 259 aaKnown RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 RNF26Q9BY78 433 aaPredicted RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 PPP1R9AQ9ULJ8 1098 aa8.79□□□□□ -1
ABCA4-202ENST00000460514 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
ABCA4-202ENST00000460514 BTBD19C9JJ37 291 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 hCG_1984214I3L0E3 225 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 PDHXO00330 501 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 PLEKHA8P1O95397 391 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 DEXIO95424 95 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 LARGE1O95461 756 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 XBP1P17861 261 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 CDC27P30260 824 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 GCLCP48506 637 aaPredicted RBP8.78□□□□□ -1
ABCA4-202ENST00000460514 CUL4AQ13619 759 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 MOGSQ13724 837 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 TREML2Q5T2D2 321 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 TTBK2Q6IQ55 1244 aa8.78□□□□□ -1
ABCA4-202ENST00000460514 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms