RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 TEX13BQ9BXU2 312 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 FEM1BQ9UK73 627 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 MTMR7Q9Y216 660 aa18.31■□□□□ 0.52
SDF4-204ENST00000459994 ZNF536O15090 1300 aa18.3■□□□□ 0.52
SDF4-204ENST00000459994 ORC4O43929 436 aa18.3■□□□□ 0.52
SDF4-204ENST00000459994 NOVP48745 357 aa18.3■□□□□ 0.52
SDF4-204ENST00000459994 RRP12Q5JTH9 1297 aaKnown RBP18.3■□□□□ 0.52
SDF4-204ENST00000459994 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
SDF4-204ENST00000459994 FGD4Q96M96 766 aa18.3■□□□□ 0.52
SDF4-204ENST00000459994 SENP6Q9GZR1 1112 aaPredicted RBP18.3■□□□□ 0.52
SDF4-204ENST00000459994 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
SDF4-204ENST00000459994 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
SDF4-204ENST00000459994 DNAJC25-GNG10A0A024R161 153 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 ATP2A1O14983 1001 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 SEPT4O43236 478 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 NT5C2P49902 561 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 KRT32Q14532 448 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 KCTD2Q14681 263 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 TINF2Q9BSI4 451 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 TOMM22Q9NS69 142 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
SDF4-204ENST00000459994 SYNPO2Q9UMS6 1093 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 MYH6P13533 1939 aa18.29■□□□□ 0.52
SDF4-204ENST00000459994 NEDD4P46934 1319 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 ZBED4O75132 1171 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 ZNF865P0CJ78 1059 aaPredicted RBP18.28■□□□□ 0.52
SDF4-204ENST00000459994 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
SDF4-204ENST00000459994 TTBK2Q6IQ55 1244 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 GMCL1Q96IK5 515 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 AGBL1Q96MI9 1066 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 SLC5A4Q9NY91 659 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
SDF4-204ENST00000459994 E7EWF7 191 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 MSCO60682 206 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 SNAI1O95863 264 aaPredicted RBP18.27■□□□□ 0.52
SDF4-204ENST00000459994 SLC1A4P43007 532 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 STAT2P52630 851 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 STOX1Q6ZVD7 989 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 GDF15Q99988 308 aa18.27■□□□□ 0.52
SDF4-204ENST00000459994 DIS3Q9Y2L1 958 aaKnown RBP18.27■□□□□ 0.52
SDF4-204ENST00000459994 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
SDF4-204ENST00000459994 DNM1LO00429 736 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
SDF4-204ENST00000459994 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
SDF4-204ENST00000459994 COPB2P35606 906 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 IRX5P78411 483 aaPredicted RBP18.26■□□□□ 0.51
SDF4-204ENST00000459994 LRRC41Q15345 812 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 TMEM47Q9BQJ4 181 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 TM6SF1Q9BZW5 370 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 CNNM2Q9H8M5 875 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
SDF4-204ENST00000459994 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
SDF4-204ENST00000459994 ADCY6O43306 1168 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 PSMA5P28066 241 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 SLC16A2P36021 539 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 MAGEA10P43363 369 aaPredicted RBP18.25■□□□□ 0.51
SDF4-204ENST00000459994 CNTN2Q02246 1040 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 TRDNQ13061 729 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 IKQ13123 557 aaPredicted RBP18.25■□□□□ 0.51
SDF4-204ENST00000459994 MUM1L1Q5H9M0 696 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 CCDC174Q6PII3 467 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.25■□□□□ 0.51
SDF4-204ENST00000459994 DDX11Q96FC9 970 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 KRT23Q9C075 422 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 CTDP1Q9Y5B0 961 aaPredicted RBP18.25■□□□□ 0.51
SDF4-204ENST00000459994 LAMA3Q16787 3333 aa18.25■□□□□ 0.51
SDF4-204ENST00000459994 PGK1P00558 417 aa18.24■□□□□ 0.51
SDF4-204ENST00000459994 FAM160B2Q86V87 743 aa18.24■□□□□ 0.51
SDF4-204ENST00000459994 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
SDF4-204ENST00000459994 FERMT2Q96AC1 680 aa18.24■□□□□ 0.51
SDF4-204ENST00000459994 NEK1Q96PY6 1258 aa18.24■□□□□ 0.51
SDF4-204ENST00000459994 KIF2CQ99661 725 aa18.24■□□□□ 0.51
SDF4-204ENST00000459994 ASTN1O14525 1302 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 HMGB1P09429 215 aaKnown RBP18.23■□□□□ 0.51
SDF4-204ENST00000459994 ADCYAP1R1P41586 468 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 OAZ1P54368 228 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 RTP1P59025 263 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 CCDC96Q2M329 555 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 ANKRD35Q8N283 1001 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 CHST13Q8NET6 341 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 IL27Q8NEV9 243 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 CHURC1Q8WUH1 139 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
SDF4-204ENST00000459994 GPCPD1Q9NPB8 672 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
SDF4-204ENST00000459994 RNF146Q9NTX7 359 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 TCP11L1Q9NUJ3 509 aa18.23■□□□□ 0.51
SDF4-204ENST00000459994 PLA2G6O60733 806 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 ALAS1P13196 640 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 SLC39A5Q6ZMH5 540 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms