RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ZSWIM6	Q9HCJ5	1215 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	FLRT1	Q9NZU1	646 aa		11.99	□□□□□ -0.49
MRPL55-223	ENST00000459783	ZNF236	Q9UL36	1845 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	KLRF2	D3W0D1	207 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	ADCY3	O60266	1144 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	DDAH1	O94760	285 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	PLEKHA8P1	O95397	391 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	SLC25A27	O95847	323 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	ICAM1	P05362	532 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	HOXD10	P28358	340 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	ADORA2A	P29274	412 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	SLC4A3	P48751	1232 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	MAP2K5	Q13163	448 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	TOB2	Q14106	344 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	ARHGEF6	Q15052	776 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	APOA5	Q6Q788	366 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	BLOC1S2	Q6QNY1	142 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783		Q6ZUG5	572 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCDC144CP	Q8IYA2	1237 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	NUP133	Q8WUM0	1156 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	MTMR8	Q96EF0	704 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	FGD4	Q96M96	766 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	NUDT12	Q9BQG2	462 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	MROH8	Q9H579	483 aa		11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-223	ENST00000459783	DNAJC25-GNG10	A0A024R161	153 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	PGK2	P07205	417 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	HOXC6	P09630	235 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	FDX1	P10109	184 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	GRK4	P32298	578 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	APOBR	Q0VD83	1088 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	MTFR1	Q15390	333 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	CDC37	Q16543	378 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	QRICH1	Q2TAL8	776 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	NFXL1	Q6ZNB6	911 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	RUFY3	Q7L099	469 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	CATIP	Q7Z7H3	387 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	CMTR1	Q8N1G2	835 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	RAET1E	Q8TD07	263 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	SOCS4	Q8WXH5	440 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	CLEC4D	Q8WXI8	215 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	ZNF333	Q96JL9	665 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	KIF2C	Q99661	725 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	APBA2	Q99767	749 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	TM6SF1	Q9BZW5	370 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	RIOX1	Q9H6W3	641 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	VAT1L	Q9HCJ6	419 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	HOMER2	Q9NSB8	354 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	RNF146	Q9NTX7	359 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCPG1	Q9ULG6	757 aa		11.97	□□□□□ -0.49
MRPL55-223	ENST00000459783	ASTN1	O14525	1302 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	KLF18	A0A0U1RQI7	1052 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCDC69	A6NI79	296 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	NFIB	O00712	420 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	OPLAH	O14841	1288 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	STRN	O43815	780 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	HMGB1	P09429	215 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	XRCC5	P13010	732 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	ALAS1	P13196	640 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	RGS2	P41220	211 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	MLLT1	Q03111	559 aa	Predicted RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	FUT2	Q10981	343 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	SLC9C1	Q4G0N8	1177 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	MICU3	Q86XE3	530 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	CCAR1	Q8IX12	1150 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	ABRA	Q8N0Z2	381 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	TMTC2	Q8N394	836 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	FBXL16	Q8N461	479 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	SRBD1	Q8N5C6	995 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	PXYLP1	Q8TE99	480 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	BRF1	Q92994	677 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	PURB	Q96QR8	312 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	PIGS	Q96S52	555 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	MMP19	Q99542	508 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	MAP3K14	Q99558	947 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	LARP6	Q9BRS8	491 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	A1CF	Q9NQ94	594 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	SLC12A7	Q9Y666	1083 aa		11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	DDX49	Q9Y6V7	483 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-223	ENST00000459783	SMCHD1	A6NHR9	2005 aa		11.96	□□□□□ -0.5
MRPL55-223	ENST00000459783	MYC	P01106	439 aa	Predicted RBP	11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	INHA	P05111	366 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	FCER1A	P12319	257 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	PSMA5	P28066	241 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	CDC27	P30260	824 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	EVC	P57679	992 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	ANAPC15	P60006	121 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	ZNF792	Q3KQV3	632 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	MAP3K21	Q5TCX8	1036 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	TMTC3	Q6ZXV5	915 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	FANCB	Q8NB91	859 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	SLAIN1	Q8ND83	568 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	CHST13	Q8NET6	341 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	TBC1D5	Q92609	795 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	TRERF1	Q96PN7	1200 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	IVNS1ABP	Q9Y6Y0	642 aa		11.95	□□□□□ -0.5
MRPL55-223	ENST00000459783	NID2	Q14112	1375 aa		11.94	□□□□□ -0.5
MRPL55-223	ENST00000459783	hCG_1642624	A0A1W2PR95	340 aa		11.94	□□□□□ -0.5

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