RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 REXO2Q9Y3B8 237 aaKnown RBP9.56□□□□□ -0.88
VPS50-208ENST00000458707 EPN1Q9Y6I3 576 aaPredicted RBP9.56□□□□□ -0.88
VPS50-208ENST00000458707 KAT6BQ8WYB5 2073 aa9.56□□□□□ -0.88
VPS50-208ENST00000458707 KCNJ18B7U540 433 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 WNT7AO00755 349 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 NDUFA10O95299 355 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 SLC5A1P13866 664 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 IL2RBP14784 551 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 KRT9P35527 623 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 AKAP17AQ02040 695 aaKnown RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 PPARAQ07869 468 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 PAK1Q13153 545 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 KCNJ12Q14500 433 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 ZKSCAN8Q15776 578 aaPredicted RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 RRP12Q5JTH9 1297 aaKnown RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 ZNF658Q5TYW1 1059 aaPredicted RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 PAPD7Q5XG87 772 aaKnown RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 WWC2Q6AWC2 1192 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 DNAJC10Q8IXB1 793 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 ANKRD20A12PQ8NF67 263 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 NUP133Q8WUM0 1156 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 NUP88Q99567 741 aaPredicted RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 DNAJC7Q99615 494 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 UBAC1Q9BSL1 405 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 PRDM16Q9HAZ2 1276 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 SLC4A4Q9Y6R1 1079 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 TNKSO95271 1327 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 ZC3H4Q9UPT8 1303 aaKnown RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 A0A1W2PQC6 194 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 SYF2O95926 243 aaKnown RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 CDC25AP30304 524 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 MAP9Q49MG5 647 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
VPS50-208ENST00000458707 TTC38Q5R3I4 469 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 RRAGBQ5VZM2 374 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 NCAPH2Q6IBW4 605 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 LRRC31Q6UY01 552 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 TOM1L2Q6ZVM7 507 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 ESR2Q92731 530 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 CCDC102AQ96A19 550 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 MTRQ99707 1265 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 SLF1Q9BQI6 1058 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 VPS16Q9H269 839 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 RMND1Q9NWS8 449 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 RSPH14Q9UHP6 348 aa9.55□□□□□ -0.88
VPS50-208ENST00000458707 H7C1D1 291 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 STARD3NLO95772 234 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 GPTP24298 496 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 MAGEA9P43362 315 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 GTF2A1P52655 376 aaPredicted RBP9.54□□□□□ -0.88
VPS50-208ENST00000458707 PTGDRQ13258 359 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 IRF2BP1Q8IU81 584 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 OR8K1Q8NGG5 319 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 ZNF507Q8TCN5 953 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 NELFBQ8WX92 580 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 CHP1Q99653 195 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 FAM204AQ9H8W3 233 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 TAB2Q9NYJ8 693 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 TMOD3Q9NYL9 352 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 HPCAL4Q9UM19 191 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
VPS50-208ENST00000458707 MAST2Q6P0Q8 1798 aa9.54□□□□□ -0.88
VPS50-208ENST00000458707 ATAD5Q96QE3 1844 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 RNF40O75150 1001 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 PPFIA4O75335 1185 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 FGRP09769 529 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 CALM1P0DP23 149 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 CALM2P0DP24 149 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 CALM3P0DP25 149 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 CORO7P57737 925 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 HERVK_113P62684 666 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 ZNF174Q15697 407 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 MEA1Q16626 185 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 ENAHQ8N8S7 591 aaPredicted RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 EHBP1Q8NDI1 1231 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 TRMT112Q9UI30 125 aaKnown RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 CAPN11Q9UMQ6 739 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 SAR1BQ9Y6B6 198 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 WNK3Q9BYP7 1800 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 PDS5AQ29RF7 1337 aaKnown RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 TTC26A0AVF1 554 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 LGALS16A8MUM7 142 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 ERVV-1B6SEH8 477 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 SHOX2O60902 331 aaPredicted RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 RPN1P04843 607 aaKnown RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 PCP11498 1178 aaKnown RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 EEF1GP26641 437 aaKnown RBP9.53□□□□□ -0.88
VPS50-208ENST00000458707 UBXN1Q04323 297 aa9.53□□□□□ -0.88
VPS50-208ENST00000458707 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms