RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
SCFD1-203ENST00000458591 LRRIQ3A6PVS8 624 aaPredicted RBP15.89■□□□□ 0.13
SCFD1-203ENST00000458591 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
SCFD1-203ENST00000458591 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
SCFD1-203ENST00000458591 LACRTQ9GZZ8 138 aa15.89■□□□□ 0.13
SCFD1-203ENST00000458591 ATP8A2Q9NTI2 1148 aa15.89■□□□□ 0.13
SCFD1-203ENST00000458591 STX8Q9UNK0 236 aa15.89■□□□□ 0.13
SCFD1-203ENST00000458591 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
SCFD1-203ENST00000458591 H7C1D1 291 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 ZNF185O15231 689 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 UBA7P41226 1012 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 USP5P45974 858 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 CYP27A1Q02318 531 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 SPAG1Q07617 926 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 STK4Q13043 487 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 ANKRD20A12PQ8NF67 263 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 OR8K1Q8NGG5 319 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 VAT1LQ9HCJ6 419 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 RMND1Q9NWS8 449 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 ARPP21Q9UBL0 812 aaPredicted RBP15.88■□□□□ 0.13
SCFD1-203ENST00000458591 FAN1Q9Y2M0 1017 aa15.88■□□□□ 0.13
SCFD1-203ENST00000458591 LUC7L2Q9Y383 392 aaKnown RBP15.88■□□□□ 0.13
SCFD1-203ENST00000458591 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 LGALS16A8MUM7 142 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 CAPN2P17655 700 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 C12orf60Q5U649 245 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 ANKRD40Q6AI12 368 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 DZIP1Q86YF9 867 aaKnown RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 GSPT2Q8IYD1 628 aaKnown RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 TGFBRAP1Q8WUH2 860 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 MKNK2Q9HBH9 465 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 PLCG1P19174 1290 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 KIF5BP33176 963 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 CASP8Q14790 479 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 TXNRD1Q16881 649 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 CCDC122Q5T0U0 273 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 TTI2Q6NXR4 508 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 HDXQ7Z353 690 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 MAPKAPK5Q8IW41 473 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 SMCR8Q8TEV9 937 aaPredicted RBP15.87■□□□□ 0.13
SCFD1-203ENST00000458591 A0A1B0GUL6 1792 aa15.87■□□□□ 0.13
SCFD1-203ENST00000458591 STXBP3O00186 592 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 PLEKP08567 350 aaPredicted RBP15.86■□□□□ 0.13
SCFD1-203ENST00000458591 CALML3P27482 149 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 MRPS25P82663 173 aaKnown RBP15.86■□□□□ 0.13
SCFD1-203ENST00000458591 LETM2Q2VYF4 491 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 SBK1Q52WX2 424 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 CCDC178Q5BJE1 867 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 HNRNPLLQ8WVV9 542 aaKnown RBP15.86■□□□□ 0.13
SCFD1-203ENST00000458591 TSPYL1Q9H0U9 437 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
SCFD1-203ENST00000458591 WHAMMP3Q1A5X7 153 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.86■□□□□ 0.13
SCFD1-203ENST00000458591 KRT26Q7Z3Y9 468 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 TMEM47Q9BQJ4 181 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 TUBGCP2Q9BSJ2 902 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 KBTBD4Q9NVX7 518 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
SCFD1-203ENST00000458591 TSPY3P0CV98 308 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 TSPY8P0CW00 308 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 TECP42680 631 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 GRM4Q14833 912 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 FOXR1Q6PIV2 292 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 GIMAP8Q8ND71 665 aaPredicted RBP15.85■□□□□ 0.13
SCFD1-203ENST00000458591 CCDC102AQ96A19 550 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 PCMTD1Q96MG8 357 aaPredicted RBP15.85■□□□□ 0.13
SCFD1-203ENST00000458591 DNAJC7Q99615 494 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 LCMT1Q9UIC8 334 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 CAPN11Q9UMQ6 739 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 FLT1P17948 1338 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 PDS5AQ29RF7 1337 aaKnown RBP15.85■□□□□ 0.13
SCFD1-203ENST00000458591 MACROD2A1Z1Q3 448 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
SCFD1-203ENST00000458591 PDE4DQ08499 809 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 USP17L2Q6R6M4 530 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 CLEC4GQ6UXB4 293 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
SCFD1-203ENST00000458591 NLRP3Q96P20 1036 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 TMEM260Q9NX78 707 aa15.85■□□□□ 0.13
SCFD1-203ENST00000458591 PDE2AO00408 941 aaPredicted RBP15.84■□□□□ 0.13
SCFD1-203ENST00000458591 RHOBTB3O94955 611 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 TRIM14Q14142 442 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 ZSCAN26Q16670 478 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 CABP7Q86V35 215 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 TULP2O00295 520 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 ZNF263O14978 683 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 EPHB6O15197 1021 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
SCFD1-203ENST00000458591 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 ATP2B2Q01814 1243 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 RAD51AP2Q09MP3 1159 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 TBC1D8BQ0IIM8 1120 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
SCFD1-203ENST00000458591 DGKHQ86XP1 1220 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms