RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 MINDY4BA8MYZ0 360 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
HDLBP-227ENST00000458564 ASGR1P07306 291 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 C6orf222P0C671 652 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-227ENST00000458564 TDO2P48775 406 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 PPIGQ13427 754 aaKnown RBP eCLIP12.44□□□□□ -0.424e-34■□□□□ 8
HDLBP-227ENST00000458564 CCDC144BQ3MJ40 725 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 ARMCX2Q7L311 632 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 FAM126BQ8IXS8 530 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDLBP-227ENST00000458564 RAVER2Q9HCJ3 691 aaKnown RBP12.44□□□□□ -0.42
HDLBP-227ENST00000458564 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
HDLBP-227ENST00000458564 CTDP1Q9Y5B0 961 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-227ENST00000458564 MYH4Q9Y623 1939 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 ARVCFO00192 962 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 CTAGE5O15320 804 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
HDLBP-227ENST00000458564 CCDC144CPQ8IYA2 1237 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-227ENST00000458564 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
HDLBP-227ENST00000458564 FAM133AQ8N9E0 248 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
HDLBP-227ENST00000458564 TIFAQ96CG3 184 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 ZNF576Q9H609 170 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 DCTPP1Q9H773 170 aa12.43□□□□□ -0.42
HDLBP-227ENST00000458564 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 PATL2C9JE40 543 aaKnown RBP12.42□□□□□ -0.42
HDLBP-227ENST00000458564 M0R2C6 588 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 PRDM1O75626 825 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 CD4P01730 458 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 BMP3P12645 472 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 STAT2P52630 851 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-227ENST00000458564 GNASQ5JWF2 1037 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 TMEM240Q5SV17 173 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 SLFN13Q68D06 897 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 PSRC1Q6PGN9 363 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-227ENST00000458564 C16orf59Q7L2K0 433 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 GMCL1Q96IK5 515 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
HDLBP-227ENST00000458564 MCM3APO60318 1980 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 ZNF536O15090 1300 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 TLR3O15455 904 aaKnown RBP12.41□□□□□ -0.42
HDLBP-227ENST00000458564 PLA2G6O60733 806 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 CSF2RAP15509 400 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 PDE4BQ07343 736 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 TKFCQ3LXA3 575 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
HDLBP-227ENST00000458564 CCDC129Q6ZRS4 1044 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 FAM160B2Q86V87 743 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 SEZ6LQ9BYH1 1024 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 NACAP1Q9BZK3 213 aa12.41□□□□□ -0.42
HDLBP-227ENST00000458564 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
HDLBP-227ENST00000458564 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
HDLBP-227ENST00000458564 ASTN1O14525 1302 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 TTC41PQ6P2S7 1318 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 ASB14A6NK59 587 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 CABYRO75952 493 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 APPP05067 770 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
HDLBP-227ENST00000458564 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 CNTN2Q02246 1040 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 USP38Q8NB14 1042 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 CHURC1Q8WUH1 139 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 PBX4Q9BYU1 374 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 HOMER2Q9NSB8 354 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
HDLBP-227ENST00000458564 XIRP2A4UGR9 3374 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-227ENST00000458564 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 SLC1A4P43007 532 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 TFAP4Q01664 338 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 TNFAIP2Q03169 654 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 PPARAQ07869 468 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 ZMYM1Q5SVZ6 1142 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 TLK2Q86UE8 772 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 HERVK_113Q902F9 699 aa12.39□□□□□ -0.43
HDLBP-227ENST00000458564 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms