RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 CUL3Q13618 768 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 KRT72Q14CN4 511 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 CWF19L1Q69YN2 538 aaKnown RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 NOL8Q76FK4 1167 aaKnown RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 PLA2G4DQ86XP0 818 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 LRRC8AQ8IWT6 810 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 CCDC65Q8IXS2 484 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 CCAR2Q8N163 923 aaKnown RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 NME8Q8N427 588 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 AFAP1Q8N556 730 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 C3orf20Q8ND61 904 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 B4GALNT2Q8NHY0 566 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 AFAP1L1Q8TED9 768 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 GOLGA1Q92805 767 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 GCC1Q96CN9 775 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 SPDL1Q96EA4 605 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 TMX3Q96JJ7 454 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 MAK16Q9BXY0 300 aaKnown RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 FUT8Q9BYC5 575 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 TRIM5Q9C035 493 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 TRIM4Q9C037 500 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 KIF9Q9HAQ2 790 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 KLC4Q9NSK0 619 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 FAM169AQ9Y6X4 670 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 ATP10AO60312 1499 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 E9PCH4 1651 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 TROQ12816 1431 aaPredicted RBP6.32□□□□□ -1.4
HMGB4-202ENST00000458277 PPIP5K1Q6PFW1 1433 aa6.32□□□□□ -1.4
HMGB4-202ENST00000458277 RTL1A6NKG5 1358 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 RPGRIP1LQ68CZ1 1315 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 KDM5DQ9BY66 1539 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 TEX14Q8IWB6 1497 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 WDR64B1ANS9 1081 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 F8VZ95 297 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 EXOC5O00471 708 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 ZSCAN12O43309 604 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 WISP1O95388 367 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 RARAP10276 462 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 SKIP12755 728 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 IDO1P14902 403 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 FLT3P36888 993 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 TRPC1P48995 793 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 ETF1P62495 437 aaKnown RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 IFT88Q13099 833 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 HIF1AQ16665 826 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 LONRF3Q496Y0 759 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 TBC1D10BQ4KMP7 808 aaPredicted RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 MTHFD1LQ6UB35 978 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 CRELD2Q6UXH1 353 aaPredicted RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 CBLL1Q75N03 491 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 GET4Q7L5D6 327 aaPredicted RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 CEP57Q86XR8 500 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 ERMNQ8TAM6 284 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 PLD4Q96BZ4 506 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 SLX1AQ9BQ83 275 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 PAGR1Q9BTK6 254 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 BHMT2Q9H2M3 363 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 PRM3Q9NNZ6 103 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 ZNHIT6Q9NWK9 470 aaKnown RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 SPATA7Q9P0W8 599 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 CIDEBQ9UHD4 219 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 HOOK1Q9UJC3 728 aaKnown RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 BARX2Q9UMQ3 279 aaPredicted RBP6.31□□□□□ -1.4
HMGB4-202ENST00000458277 DAAM1Q9Y4D1 1078 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 KIF13AQ9H1H9 1805 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 UHRF1BP1Q6BDS2 1440 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 KDM5CP41229 1560 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 ANKRD30BQ9BXX2 1392 aa6.31□□□□□ -1.4
HMGB4-202ENST00000458277 EHBP1L1Q8N3D4 1523 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 GCC2Q8IWJ2 1684 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ABCC10Q5T3U5 1492 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 CCDC141Q6ZP82 1450 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 RALGAPBQ86X10 1494 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 GOLGA6L10A0A0M3HER8 536 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 DBX1A6NMT0 343 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 NPHP1O15259 732 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 RAD21O60216 631 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 PPP1R12BO60237 982 aaPredicted RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ZEB2O60315 1214 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 SHOX2O60902 331 aaPredicted RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 TADA3O75528 432 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 PENKP01210 267 aaPredicted RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 VIL1P09327 827 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 FAM163BP0C2L3 166 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 GRNP28799 593 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 CNGA1P29973 690 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 RANBP1P43487 201 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 LIG3P49916 1009 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 NUCB1Q02818 461 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 NCOA4Q13772 614 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 MVPQ14764 893 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 ENOX2Q16206 610 aaKnown RBP6.3□□□□□ -1.4
HMGB4-202ENST00000458277 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
HMGB4-202ENST00000458277 MFSD4BQ5TF39 518 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms