RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 FDX1P10109 184 aa21.89■■□□□ 1.09
USP39-209ENST00000458268 PRAMEF19Q5SWL8 479 aa21.89■■□□□ 1.09
USP39-209ENST00000458268 MAML3Q96JK9 1138 aa21.89■■□□□ 1.09
USP39-209ENST00000458268 UBA5Q9GZZ9 404 aa21.89■■□□□ 1.09
USP39-209ENST00000458268 PDE4DIPQ5VU43 2346 aa21.89■■□□□ 1.09
USP39-209ENST00000458268 FRMPD3Q5JV73 1810 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 ATP2A1O14983 1001 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
USP39-209ENST00000458268 OAZ1P54368 228 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 MAP3K21Q5TCX8 1036 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 ANO1Q5XXA6 986 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 TRERF1Q96PN7 1200 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 ACAD9Q9H845 621 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 FBXO40Q9UH90 709 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 SMCHD1A6NHR9 2005 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 MYH6P13533 1939 aa21.88■■□□□ 1.09
USP39-209ENST00000458268 ZNF536O15090 1300 aa21.87■■□□□ 1.09
USP39-209ENST00000458268 PLA2G6O60733 806 aa21.87■■□□□ 1.09
USP39-209ENST00000458268 NT5C2P49902 561 aa21.87■■□□□ 1.09
USP39-209ENST00000458268 NSMFQ6X4W1 530 aa21.87■■□□□ 1.09
USP39-209ENST00000458268 CHST13Q8NET6 341 aa21.87■■□□□ 1.09
USP39-209ENST00000458268 SLC27A2O14975 620 aa21.86■■□□□ 1.09
USP39-209ENST00000458268 SART3Q15020 963 aaKnown RBP21.86■■□□□ 1.09
USP39-209ENST00000458268 OLFML2BQ68BL8 750 aa21.86■■□□□ 1.09
USP39-209ENST00000458268 CREB3L3Q68CJ9 461 aa21.86■■□□□ 1.09
USP39-209ENST00000458268 DIS3LQ8TF46 1054 aaKnown RBP21.86■■□□□ 1.09
USP39-209ENST00000458268 VAT1LQ9HCJ6 419 aa21.86■■□□□ 1.09
USP39-209ENST00000458268 MCM3APO60318 1980 aa21.86■■□□□ 1.09
USP39-209ENST00000458268 PARP1P09874 1014 aaKnown RBP21.85■■□□□ 1.09
USP39-209ENST00000458268 WTAPQ15007 396 aa21.85■■□□□ 1.09
USP39-209ENST00000458268 ZNF792Q3KQV3 632 aa21.85■■□□□ 1.09
USP39-209ENST00000458268 USH1GQ495M9 461 aa21.85■■□□□ 1.09
USP39-209ENST00000458268 MUM1L1Q5H9M0 696 aa21.85■■□□□ 1.09
USP39-209ENST00000458268 TMEM67Q5HYA8 995 aa21.85■■□□□ 1.09
USP39-209ENST00000458268 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
USP39-209ENST00000458268 TRPV1Q8NER1 839 aa21.85■■□□□ 1.09
USP39-209ENST00000458268 PAWRQ96IZ0 340 aaKnown RBP21.85■■□□□ 1.09
USP39-209ENST00000458268 RANBP17Q9H2T7 1088 aaKnown RBP21.85■■□□□ 1.09
USP39-209ENST00000458268 TNRC18O15417 2968 aaPredicted RBP21.84■■□□□ 1.09
USP39-209ENST00000458268 BRCA2P51587 3418 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 ICAM1P05362 532 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 SNHG28P0DPA3 235 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 BTNL9Q6UXG8 535 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 DPF3Q92784 378 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 TINF2Q9BSI4 451 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 SENP2Q9HC62 589 aa21.84■■□□□ 1.09
USP39-209ENST00000458268 POTEB2H3BUK9 544 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 CYBAP13498 195 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 CNTN2Q02246 1040 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 SEC23AQ15436 765 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 TKFCQ3LXA3 575 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 ANKS1AQ92625 1134 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 CRISPLD2Q9H0B8 497 aa21.83■■□□□ 1.09
USP39-209ENST00000458268 DDX20Q9UHI6 824 aaKnown RBP21.83■■□□□ 1.09
USP39-209ENST00000458268 ZHX1Q9UKY1 873 aaPredicted RBP21.83■■□□□ 1.09
USP39-209ENST00000458268 PRC1O43663 620 aa21.82■■□□□ 1.08
USP39-209ENST00000458268 ANTXR2P58335 489 aa21.82■■□□□ 1.08
USP39-209ENST00000458268 RNF20Q5VTR2 975 aa21.82■■□□□ 1.08
USP39-209ENST00000458268 NFXL1Q6ZNB6 911 aa21.82■■□□□ 1.08
USP39-209ENST00000458268 MB21D2Q8IYB1 491 aaPredicted RBP21.82■■□□□ 1.08
USP39-209ENST00000458268 NUP133Q8WUM0 1156 aa21.82■■□□□ 1.08
USP39-209ENST00000458268 A1CFQ9NQ94 594 aaKnown RBP21.82■■□□□ 1.08
USP39-209ENST00000458268 CNPY2Q9Y2B0 182 aa21.82■■□□□ 1.08
USP39-209ENST00000458268 PTPDC1A2A3K4 754 aa21.81■■□□□ 1.08
USP39-209ENST00000458268 CDC37Q16543 378 aaPredicted RBP21.81■■□□□ 1.08
USP39-209ENST00000458268 ADGRF4Q8IZF3 695 aa21.81■■□□□ 1.08
USP39-209ENST00000458268 STAG2Q8N3U4 1231 aa21.81■■□□□ 1.08
USP39-209ENST00000458268 HTATIP2Q9BUP3 242 aa21.81■■□□□ 1.08
USP39-209ENST00000458268 LRRC2Q9BYS8 371 aa21.81■■□□□ 1.08
USP39-209ENST00000458268 GPHNQ9NQX3 736 aaPredicted RBP21.81■■□□□ 1.08
USP39-209ENST00000458268 NFIBO00712 420 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 NECTIN1Q15223 517 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 ERICH6BQ5W0A0 696 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 LHX8Q68G74 356 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 NECAB2Q7Z6G3 386 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 OGDHLQ9ULD0 1010 aa21.8■■□□□ 1.08
USP39-209ENST00000458268 DIS3Q9Y2L1 958 aaKnown RBP21.8■■□□□ 1.08
USP39-209ENST00000458268 DNAJC25-GNG10A0A024R161 153 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 CALML3P27482 149 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 MCM5P33992 734 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 CATIPQ7Z7H3 387 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 RAB11FIP4Q86YS3 637 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 PIBF1Q8WXW3 757 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 LENG1Q96BZ8 264 aaPredicted RBP21.79■■□□□ 1.08
USP39-209ENST00000458268 DDX49Q9Y6V7 483 aaKnown RBP21.79■■□□□ 1.08
USP39-209ENST00000458268 PFASO15067 1338 aa21.79■■□□□ 1.08
USP39-209ENST00000458268 KLRF2D3W0D1 207 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 SEPT4O43236 478 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 MSCO60682 206 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 COL9A3Q14050 684 aaPredicted RBP21.78■■□□□ 1.08
USP39-209ENST00000458268 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
USP39-209ENST00000458268 HOMER1Q86YM7 354 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 ANKLE1Q8NAG6 615 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 PURBQ96QR8 312 aaKnown RBP21.78■■□□□ 1.08
USP39-209ENST00000458268 C11orf49Q9H6J7 331 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 LCTP09848 1927 aa21.78■■□□□ 1.08
USP39-209ENST00000458268 BAZ2BQ9UIF8 2168 aaKnown RBP21.77■■□□□ 1.08
USP39-209ENST00000458268 CCDC69A6NI79 296 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms