RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 FSD1Q9BTV5 496 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 SEMA6BQ9H3T3 888 aa25.58■■□□□ 1.69
CPNE1-220ENST00000458038 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-220ENST00000458038 PLA2G6O60733 806 aa25.57■■□□□ 1.68
CPNE1-220ENST00000458038 PPARAQ07869 468 aa25.57■■□□□ 1.68
CPNE1-220ENST00000458038 LRRC47Q8N1G4 583 aaKnown RBP25.57■■□□□ 1.68
CPNE1-220ENST00000458038 LENG1Q96BZ8 264 aaPredicted RBP25.57■■□□□ 1.68
CPNE1-220ENST00000458038 GLT1D1Q96MS3 346 aa25.57■■□□□ 1.68
CPNE1-220ENST00000458038 FAM161BQ96MY7 647 aa25.57■■□□□ 1.68
CPNE1-220ENST00000458038 TMEM265A0A087WTH1 108 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 TMEM232C9JQI7 657 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 FPGSQ05932 587 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 FAAP100Q0VG06 881 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 TKFCQ3LXA3 575 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 STAG1Q8WVM7 1258 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 SEC62Q99442 399 aaKnown RBP25.56■■□□□ 1.68
CPNE1-220ENST00000458038 UPF3AQ9H1J1 476 aaKnown RBP25.56■■□□□ 1.68
CPNE1-220ENST00000458038 ACAD9Q9H845 621 aa25.56■■□□□ 1.68
CPNE1-220ENST00000458038 ITGB8P26012 769 aa25.55■■□□□ 1.68
CPNE1-220ENST00000458038 SLC1A4P43007 532 aa25.55■■□□□ 1.68
CPNE1-220ENST00000458038 GJA9P57773 515 aa25.55■■□□□ 1.68
CPNE1-220ENST00000458038 CCDC144BQ3MJ40 725 aa25.55■■□□□ 1.68
CPNE1-220ENST00000458038 ARMCX2Q7L311 632 aa25.55■■□□□ 1.68
CPNE1-220ENST00000458038 RNPC3Q96LT9 517 aaKnown RBP25.55■■□□□ 1.68
CPNE1-220ENST00000458038 C6orf222P0C671 652 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-220ENST00000458038 MX1P20591 662 aa25.54■■□□□ 1.68
CPNE1-220ENST00000458038 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.54■■□□□ 1.68
CPNE1-220ENST00000458038 FGD4Q96M96 766 aa25.54■■□□□ 1.68
CPNE1-220ENST00000458038 CDX2Q99626 313 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-220ENST00000458038 ZBTB47Q9UFB7 747 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-220ENST00000458038 PCDHB15Q9Y5E8 787 aa25.54■■□□□ 1.68
CPNE1-220ENST00000458038 ASB14A6NK59 587 aa25.53■■□□□ 1.68
CPNE1-220ENST00000458038 TIMP1P01033 207 aa25.53■■□□□ 1.68
CPNE1-220ENST00000458038 NKX3-2P78367 333 aa25.53■■□□□ 1.68
CPNE1-220ENST00000458038 IKQ13123 557 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-220ENST00000458038 ISY1Q9ULR0 285 aaKnown RBP25.53■■□□□ 1.68
CPNE1-220ENST00000458038 TSPY2A6NKD2 308 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 ASGR1P07306 291 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 CDK7P50613 346 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 GNASQ5JWF2 1037 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 RCSD1Q6JBY9 416 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 CCDC174Q6PII3 467 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 TICAM2Q86XR7 235 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 CCDC144CPQ8IYA2 1237 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 FAM133AQ8N9E0 248 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 VTI1AQ96AJ9 217 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 HOMER2Q9NSB8 354 aa25.52■■□□□ 1.68
CPNE1-220ENST00000458038 PRUNE2Q8WUY3 3088 aa25.51■■□□□ 1.67
CPNE1-220ENST00000458038 A0A0U1RQG5 324 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-220ENST00000458038 MCCP23508 829 aa25.51■■□□□ 1.67
CPNE1-220ENST00000458038 RNF146Q9NTX7 359 aa25.51■■□□□ 1.67
CPNE1-220ENST00000458038 TBX21Q9UL17 535 aa25.51■■□□□ 1.67
CPNE1-220ENST00000458038 STX8Q9UNK0 236 aa25.51■■□□□ 1.67
CPNE1-220ENST00000458038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.51■■□□□ 1.67
CPNE1-220ENST00000458038 EYSQ5T1H1 3165 aa25.51■■□□□ 1.67
CPNE1-220ENST00000458038 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-220ENST00000458038 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-220ENST00000458038 ARVCFO00192 962 aa25.5■■□□□ 1.67
CPNE1-220ENST00000458038 MFSD5Q6N075 450 aa25.5■■□□□ 1.67
CPNE1-220ENST00000458038 SEZ6LQ9BYH1 1024 aa25.5■■□□□ 1.67
CPNE1-220ENST00000458038 ANAPC4Q9UJX5 808 aa25.5■■□□□ 1.67
CPNE1-220ENST00000458038 ZNF536O15090 1300 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 MYADML2A6NDP7 307 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 TLR3O15455 904 aaKnown RBP25.49■■□□□ 1.67
CPNE1-220ENST00000458038 EPHB4P54760 987 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 CNTN2Q02246 1040 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 PPIGQ13427 754 aaKnown RBP eCLIP25.49■■□□□ 1.671e-11■□□□□ 11.3
CPNE1-220ENST00000458038 OTUD7AQ8TE49 926 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-220ENST00000458038 EVI5LQ96CN4 794 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 AGBL1Q96MI9 1066 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 TRERF1Q96PN7 1200 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 KATNBL1Q9H079 304 aa25.49■■□□□ 1.67
CPNE1-220ENST00000458038 A1CFQ9NQ94 594 aaKnown RBP25.49■■□□□ 1.67
CPNE1-220ENST00000458038 ADCY6O43306 1168 aa25.48■■□□□ 1.67
CPNE1-220ENST00000458038 CABYRO75952 493 aa25.48■■□□□ 1.67
CPNE1-220ENST00000458038 TNFAIP2Q03169 654 aa25.48■■□□□ 1.67
CPNE1-220ENST00000458038 ALX1Q15699 326 aa25.48■■□□□ 1.67
CPNE1-220ENST00000458038 CCDC129Q6ZRS4 1044 aa25.48■■□□□ 1.67
CPNE1-220ENST00000458038 MAFAQ8NHW3 353 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-220ENST00000458038 TTYH1Q9H313 450 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-220ENST00000458038 CDH23Q9H251 3354 aa25.48■■□□□ 1.67
CPNE1-220ENST00000458038 ORC4O43929 436 aa25.47■■□□□ 1.67
CPNE1-220ENST00000458038 ALAS1P13196 640 aa25.47■■□□□ 1.67
CPNE1-220ENST00000458038 NOVP48745 357 aa25.47■■□□□ 1.67
CPNE1-220ENST00000458038 IL17RBQ9NRM6 502 aa25.47■■□□□ 1.67
CPNE1-220ENST00000458038 HELLSQ9NRZ9 838 aa25.47■■□□□ 1.67
CPNE1-220ENST00000458038 SALL3Q9BXA9 1300 aa25.46■■□□□ 1.67
CPNE1-220ENST00000458038 RANBP6O60518 1105 aaKnown RBP25.46■■□□□ 1.67
CPNE1-220ENST00000458038 CTDSPL2Q05D32 466 aa25.46■■□□□ 1.67
CPNE1-220ENST00000458038 KCTD1Q719H9 257 aa25.46■■□□□ 1.67
CPNE1-220ENST00000458038 NOL8Q76FK4 1167 aaKnown RBP25.46■■□□□ 1.67
CPNE1-220ENST00000458038 TMEM199Q8N511 208 aa25.46■■□□□ 1.67
CPNE1-220ENST00000458038 PRR12Q9ULL5 1215 aa25.46■■□□□ 1.67
CPNE1-220ENST00000458038 MYO9BQ13459 2157 aa25.46■■□□□ 1.67
CPNE1-220ENST00000458038 SOWAHBA6NEL2 793 aa25.45■■□□□ 1.66
CPNE1-220ENST00000458038 FOXP2O15409 715 aa25.45■■□□□ 1.66
CPNE1-220ENST00000458038 ZEB2O60315 1214 aa25.45■■□□□ 1.66
CPNE1-220ENST00000458038 FGRP09769 529 aa25.45■■□□□ 1.66
CPNE1-220ENST00000458038 IQSEC1Q6DN90 963 aa25.45■■□□□ 1.66
CPNE1-220ENST00000458038 DCAF4Q8WV16 495 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms