RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ZSCAN26Q16670 478 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 OTUD6AQ7L8S5 288 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 KIAA0825Q8IV33 1275 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 GBP5Q96PP8 586 aa21.57■■□□□ 1.04
SNX27-204ENST00000458013 IBTKQ9P2D0 1353 aaPredicted RBP21.56■■□□□ 1.04
SNX27-204ENST00000458013 CLTAP09496 248 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 ARHGAP25P42331 645 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 IFNAR2P48551 515 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 TUBB2AQ13885 445 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 SPDL1Q96EA4 605 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 CHMP6Q96FZ7 201 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 TUBB2BQ9BVA1 445 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 MX2P20592 715 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 FNDC3AQ9Y2H6 1198 aaKnown RBP21.56■■□□□ 1.04
SNX27-204ENST00000458013 ZMYM4Q5VZL5 1548 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 JADE1Q6IE81 842 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 CXCR5P32302 372 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 PPFIA1Q13136 1202 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 RFX6Q8HWS3 928 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 WHAMMQ8TF30 809 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 PDE11AQ9HCR9 933 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 DISC1Q9NRI5 854 aa21.56■■□□□ 1.04
SNX27-204ENST00000458013 NIM1KQ8IY84 436 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 ARHGAP24Q8N264 748 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 ZNF653Q96CK0 615 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 KIAA1468Q9P260 1216 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 PYCARDQ9ULZ3 195 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 TMOD1P28289 359 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 MYSM1Q5VVJ2 828 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 TRIM56Q9BRZ2 755 aaKnown RBP21.55■■□□□ 1.04
SNX27-204ENST00000458013 DYNLT1P63172 113 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 CAPS2Q9BXY5 557 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 NOSTRINQ8IVI9 506 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 PDZD8Q8NEN9 1154 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 ATP2A3Q93084 1043 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 GJA10Q969M2 543 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 M0R2C6 588 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 RNF40O75150 1001 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 ECE1P42892 770 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 LRRC8AQ8IWT6 810 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 MICAL1Q8TDZ2 1067 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 PRPF31Q8WWY3 499 aaKnown RBP21.55■■□□□ 1.04
SNX27-204ENST00000458013 PCIF1Q9H4Z3 704 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 CACYBPQ9HB71 228 aaKnown RBP21.55■■□□□ 1.04
SNX27-204ENST00000458013 MAST3O60307 1309 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 LRRIQ4A6NIV6 560 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 SGK1O00141 431 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 PEX19P40855 299 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 SNAP25P60880 206 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 GUCY2DQ02846 1103 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 EHHADHQ08426 723 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 MESDQ14696 234 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 KCTD1Q719H9 257 aa21.55■■□□□ 1.04
SNX27-204ENST00000458013 APBA3O96018 575 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 ATF2P15336 505 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 HDAC11Q96DB2 347 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 TESK2Q96S53 571 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 TSKSQ9UJT2 592 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 PCDHA12Q9UN75 941 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 BTDP43251 543 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 CXorf38Q8TB03 319 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 ZMYM6O95789 1325 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 DKC1O60832 514 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNX27-204ENST00000458013 ADORA1P30542 326 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 HYOU1Q9Y4L1 999 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 MYCP01106 439 aaPredicted RBP21.54■■□□□ 1.04
SNX27-204ENST00000458013 SCRN1Q12765 414 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 RAPH1Q70E73 1250 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 ZNF496Q96IT1 587 aaPredicted RBP21.54■■□□□ 1.04
SNX27-204ENST00000458013 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
SNX27-204ENST00000458013 H7C0C1 242 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 TNNC2P02585 160 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 P4HA1P13674 534 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 ATP5OP48047 213 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 TRIP13Q15645 432 aaPredicted RBP21.53■■□□□ 1.04
SNX27-204ENST00000458013 TLR7Q9NYK1 1049 aaKnown RBP21.53■■□□□ 1.04
SNX27-204ENST00000458013 BCS1LQ9Y276 419 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 BTBD18B2RXH4 712 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 ADAM9Q13443 819 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 ARMCX5Q6P1M9 558 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 PCDHA7Q9UN72 937 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 MEIS1O00470 390 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 RAB3IPQ96QF0 476 aaPredicted RBP21.53■■□□□ 1.04
SNX27-204ENST00000458013 MMEL1Q495T6 779 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 CFAP61Q8NHU2 1237 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 KLHL14Q9P2G3 628 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 PHBP35232 272 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 COG7P83436 770 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 GABPB2Q8TAK5 448 aaPredicted RBP21.53■■□□□ 1.04
SNX27-204ENST00000458013 SEPT9Q9UHD8 586 aaPredicted RBP21.53■■□□□ 1.04
SNX27-204ENST00000458013 TRAPPC8Q9Y2L5 1435 aa21.53■■□□□ 1.04
SNX27-204ENST00000458013 SPECC1L-ADORA2AF8WAN1 911 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 YWHAGP61981 247 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNX27-204ENST00000458013 TMTC4Q5T4D3 741 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 METTL14Q9HCE5 456 aaKnown RBP21.52■■□□□ 1.04
SNX27-204ENST00000458013 RIC8AQ9NPQ8 531 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 PARP2Q9UGN5 583 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 KDM3AQ9Y4C1 1321 aa21.52■■□□□ 1.04
SNX27-204ENST00000458013 CLRN2A0PK11 232 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms