RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 MCL1Q07820 350 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 SQSTM1Q13501 440 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 TKFCQ3LXA3 575 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 KSR2Q6VAB6 950 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 DDX42Q86XP3 938 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 PTPRHQ9HD43 1115 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 PRDM5Q9NQX1 630 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 PICK1Q9NRD5 415 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 POLG2Q9UHN1 485 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 PUF60Q9UHX1 559 aaKnown RBP4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 TAGLN3Q9UI15 199 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 PCDHA4Q9UN74 947 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 CSADQ9Y600 493 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 USP31Q70CQ4 1352 aa4.87□□□□□ -1.63
HMGB3P30-201ENST00000457863 DYTNA2CJ06 578 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 GNAT3A8MTJ3 354 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 PRRT4C9JH25 899 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 HIP1RO75146 1068 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 RNASEH2AO75792 299 aaKnown RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 USP17L7P0C7H9 530 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 ALFQ53S48 1182 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 CCDC93Q567U6 631 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 DALRD3Q5D0E6 543 aaKnown RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 FAM83BQ5T0W9 1011 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 ERAP2Q6P179 960 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 CC2D1AQ6P1N0 951 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 DDX46Q7L014 1031 aaKnown RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 SV2BQ7L1I2 683 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 HDGFL2Q7Z4V5 671 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 C12orf40Q86WS4 652 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 SMAP1Q8IYB5 467 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 SPICE1Q8N0Z3 855 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 ELMO3Q96BJ8 720 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 FOXQ1Q9C009 403 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 MSRB2Q9Y3D2 182 aa4.86□□□□□ -1.63
HMGB3P30-201ENST00000457863 CLGNO14967 610 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 SLC26A4O43511 780 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 FARP2O94887 1054 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 ZNF865P0CJ78 1059 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 SCP2P22307 547 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 RAB27AP51159 221 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 IKZF1Q13422 519 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 LONRF1Q17RB8 773 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 ALDH1L2Q3SY69 923 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 ZNF648Q5T619 568 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 C1QTNF12Q5T7M4 302 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 LRFN4Q6PJG9 635 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 CDC37L1Q7L3B6 337 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 CYFIP1Q7L576 1253 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 KRT77Q7Z794 578 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 SUGP1Q8IWZ8 645 aaKnown RBP4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 MSL3Q8N5Y2 521 aaKnown RBP4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 ZNF507Q8TCN5 953 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 ERP27Q96DN0 273 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 TTC14Q96N46 770 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 CLIC5Q9NZA1 410 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 LMCD1Q9NZU5 365 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 FEZ2Q9UHY8 353 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 ASAP1Q9ULH1 1129 aa4.85□□□□□ -1.63
HMGB3P30-201ENST00000457863 CBFA2T2O43439 604 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 SLITRK5O94991 958 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 RASGRP1O95267 797 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 SRGNP10124 158 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 CNGA1P29973 690 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 NASPP49321 788 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 ZP2Q05996 745 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 SLBPQ14493 270 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 INPP5AQ14642 412 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 SLC4A10Q6U841 1118 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 HDXQ7Z353 690 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 ANKRD23Q86SG2 305 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 ZSCAN30Q86W11 494 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 ZSWIM9Q86XI8 627 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 BHLHE22Q8NFJ8 381 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 HNRNPLLQ8WVV9 542 aaKnown RBP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 PLPPR2Q96GM1 343 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 LRRC27Q9C0I9 530 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 WNT10AQ9GZT5 417 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 RETREG1Q9H6L5 497 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 FBRSQ9HAH7 460 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 NGRNQ9NPE2 291 aaKnown RBP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 CWC25Q9NXE8 425 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 MRVI1Q9Y6F6 885 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 SNCAIPQ9Y6H5 919 aa4.84□□□□□ -1.63
HMGB3P30-201ENST00000457863 PRAMEF27A3QJZ7 478 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 CCDC85CA6NKD9 419 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 AKAP10O43572 662 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 TCEA3O75764 348 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 RAPGEF3O95398 923 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 RBP3P10745 1247 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 RRM1P23921 792 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 ST13P50502 369 aaKnown RBP4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 PTPN11Q06124 597 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 TCEA2Q15560 299 aa4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 CDC37Q16543 378 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P30-201ENST00000457863 WIPI1Q5MNZ9 446 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms