RNA–Protein interactions for RNA: ENST00000456946.6

TRIM17-205, Transcript of tripartite motif containing 17, humanhuman

TSL 1 (best) BASIC

Gene TRIM17, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-205ENST00000456946 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
TRIM17-205ENST00000456946 SPDYE16A6NNV3 312 aaPredicted RBP18.5■□□□□ 0.55
TRIM17-205ENST00000456946 NCLP19338 710 aaKnown RBP18.5■□□□□ 0.55
TRIM17-205ENST00000456946 TM4SF4P48230 202 aa18.5■□□□□ 0.55
TRIM17-205ENST00000456946 CPLX2Q6PUV4 134 aaKnown RBP18.5■□□□□ 0.55
TRIM17-205ENST00000456946 PRPF38AQ8NAV1 312 aaKnown RBP18.5■□□□□ 0.55
TRIM17-205ENST00000456946 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
TRIM17-205ENST00000456946 PNMA3Q9UL41 463 aa18.5■□□□□ 0.55
TRIM17-205ENST00000456946 CNTNAP5Q8WYK1 1306 aa18.5■□□□□ 0.55
TRIM17-205ENST00000456946 PLA2G6O60733 806 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 MBD3O95983 291 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 NTRK3Q16288 839 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 OTUD7BQ6GQQ9 843 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 PIGSQ96S52 555 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 JMJD4Q9H9V9 463 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 COL11A1P12107 1806 aaPredicted RBP18.49■□□□□ 0.55
TRIM17-205ENST00000456946 PEX10O60683 326 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 CTDNEP1O95476 244 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 HERVK_113P62684 666 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 TAF1CQ15572 869 aaPredicted RBP18.49■□□□□ 0.55
TRIM17-205ENST00000456946 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
TRIM17-205ENST00000456946 LLPHQ9BRT6 129 aaKnown RBP18.49■□□□□ 0.55
TRIM17-205ENST00000456946 SPZ1Q9BXG8 430 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 SLC26A6Q9BXS9 759 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 HOXC10Q9NYD6 342 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 SLC45A1Q9Y2W3 748 aa18.49■□□□□ 0.55
TRIM17-205ENST00000456946 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
TRIM17-205ENST00000456946 MYH6P13533 1939 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 VPS37CA5D8V6 355 aaPredicted RBP18.48■□□□□ 0.55
TRIM17-205ENST00000456946 JAK2O60674 1132 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 IFNAR1P17181 557 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 MAP2K2P36507 400 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 FUT2Q10981 343 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 CCDC174Q6PII3 467 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 TMEM87AQ8NBN3 555 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 NSUN7Q8NE18 718 aaKnown RBP18.48■□□□□ 0.55
TRIM17-205ENST00000456946 PARK7Q99497 189 aaKnown RBP18.48■□□□□ 0.55
TRIM17-205ENST00000456946 PAGR1Q9BTK6 254 aa18.48■□□□□ 0.55
TRIM17-205ENST00000456946 CDKL5O76039 1030 aa18.47■□□□□ 0.55
TRIM17-205ENST00000456946 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
TRIM17-205ENST00000456946 FOXD4L6Q3SYB3 417 aaPredicted RBP18.47■□□□□ 0.55
TRIM17-205ENST00000456946 CAVIN1Q6NZI2 390 aaKnown RBP18.47■□□□□ 0.55
TRIM17-205ENST00000456946 FOXD4L3Q6VB84 417 aaPredicted RBP18.47■□□□□ 0.55
TRIM17-205ENST00000456946 DDX11Q96FC9 970 aa18.47■□□□□ 0.55
TRIM17-205ENST00000456946 V9GY48 417 aaPredicted RBP18.47■□□□□ 0.55
TRIM17-205ENST00000456946 MYPNQ86TC9 1320 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 VWA5AO00534 786 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 ZBED4O75132 1171 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 SSRP1Q08945 709 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 RRP36Q96EU6 259 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 TAL1P17542 331 aaPredicted RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 PLS1Q14651 629 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 POTEEQ6S8J3 1075 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 TRIM22Q8IYM9 498 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 SMARCC2Q8TAQ2 1214 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 RANBP17Q9H2T7 1088 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 SLC38A10Q9HBR0 1119 aa18.46■□□□□ 0.55
TRIM17-205ENST00000456946 RAVER2Q9HCJ3 691 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 ZCCHC17Q9NP64 241 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.55
TRIM17-205ENST00000456946 A0A0G2JMZ2 1700 aa18.45■□□□□ 0.54
TRIM17-205ENST00000456946 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
TRIM17-205ENST00000456946 MRE11P49959 708 aa18.45■□□□□ 0.54
TRIM17-205ENST00000456946 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
TRIM17-205ENST00000456946 RNF26Q9BY78 433 aaPredicted RBP18.45■□□□□ 0.54
TRIM17-205ENST00000456946 BTBD7Q9P203 1132 aa18.45■□□□□ 0.54
TRIM17-205ENST00000456946 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
TRIM17-205ENST00000456946 ZBTB5O15062 677 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
TRIM17-205ENST00000456946 USH1GQ495M9 461 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 LBX2Q6XYB7 198 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 ZFYVE28Q9HCC9 887 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 TXNRD2Q9NNW7 524 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
TRIM17-205ENST00000456946 ADAMTS5Q9UNA0 930 aa18.44■□□□□ 0.54
TRIM17-205ENST00000456946 ALDH1A1P00352 501 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 ZNF445P59923 1031 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 HMGN5P82970 282 aaKnown RBP18.43■□□□□ 0.54
TRIM17-205ENST00000456946 CRHR2Q13324 411 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 TMEM132BQ14DG7 1078 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 ANKRD13CQ8N6S4 541 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 REPS2Q8NFH8 660 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 GPKOWQ92917 476 aaPredicted RBP eCLIP18.43■□□□□ 0.54
TRIM17-205ENST00000456946 AGBL1Q96MI9 1066 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 GDPD2Q9HCC8 539 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 RBPJLQ9UBG7 517 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 CPA4Q9UI42 421 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 KIF3AQ9Y496 699 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 MYH15Q9Y2K3 1946 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
TRIM17-205ENST00000456946 PPP1R11O60927 126 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms