RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ARID5BQ14865 1188 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 FAM133BQ5BKY9 247 aaKnown RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 BEND3Q5T5X7 828 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 ARMCX5Q6P1M9 558 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 APBB1IPQ7Z5R6 666 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 FMR1NBQ8N0W7 255 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 NLRP7Q8WX94 980 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 JARID2Q92833 1246 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 PLEKHF1Q96S99 279 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 CDC5LQ99459 802 aaKnown RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 OSBPL1AQ9BXW6 950 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 SNRKQ9NRH2 765 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 CARMIL3Q8ND23 1372 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 CPSF1Q10570 1443 aaKnown RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 PRDM15P57071 1507 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 GRIN2AQ12879 1464 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 WDR7Q9Y4E6 1490 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 RPAP1Q9BWH6 1393 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 ANKRD65E5RJM6 399 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 ZWINTO95229 277 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 BAG3O95817 575 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 GSTA1P08263 222 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 DHX9Q08211 1270 aaKnown RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 C2orf54Q08AI8 447 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 SCRN1Q12765 414 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 LIN9Q5TKA1 542 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 AGBL2Q5U5Z8 902 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 GALNT17Q6IS24 598 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 KRT25Q7Z3Z0 450 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 DHX40Q8IX18 779 aaKnown RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 ZNF579Q8NAF0 562 aaKnown RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 ABTB1Q969K4 478 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-203ENST00000456367 CCT8L2Q96SF2 557 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 PSMB7Q99436 277 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 LZTS2Q9BRK4 669 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 ST7Q9NRC1 585 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 PLAAQ9Y263 795 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 FRMD4BQ9Y2L6 1034 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 CLIC4Q9Y696 253 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 PARP3Q9Y6F1 533 aa5.48□□□□□ -1.53
PCDH9-203ENST00000456367 TTC37Q6PGP7 1564 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 MAST1Q9Y2H9 1570 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 NUP153P49790 1475 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TMEM232C9JQI7 657 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ENC1O14682 589 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 RASGRF2O14827 1237 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 RPN1P04843 607 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 BCRP11274 1271 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 NAPAP54920 295 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 RNASE9P60153 205 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 VSNL1P62760 191 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TFCP2Q12800 502 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TMED1Q13445 227 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 NECTIN1Q15223 517 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ZNF658Q5TYW1 1059 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 NCAPH2Q6IBW4 605 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 LMBR1LQ6UX01 489 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 LRRC31Q6UY01 552 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 CHST3Q7LGC8 479 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 AGGF1Q8N302 714 aaeCLIP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 MGARPQ8TDB4 240 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ATP2A3Q93084 1043 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 DDX23Q9BUQ8 820 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 HPCAL4Q9UM19 191 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 EDC4Q6P2E9 1401 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TMEM110-MUSTN1A8MSY1 372 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 LAD1O00515 517 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 THAP12O43422 761 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TAF5LO75529 589 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 MMEP08473 750 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 STAT1P42224 750 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 SESN3P58005 492 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 MTHFSDQ2M296 383 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 SLC4A8Q2Y0W8 1093 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 CCNI2Q6ZMN8 369 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ACRBPQ8NEB7 543 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 FMO2Q99518 471 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TUBGCP2Q9BSJ2 902 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ANKRD2Q9GZV1 360 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 METTL14Q9HCE5 456 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 SLC40A1Q9NP59 571 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 PDP2Q9P2J9 529 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 SERPINA10Q9UK55 444 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ABCC1P33527 1531 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 ARHGAP42A6NI28 874 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TTC36A6NLP5 189 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 SRRM3A6NNA2 597 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 PODXLO00592 558 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
PCDH9-203ENST00000456367 GSTO1P78417 241 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 PSMD2Q13200 908 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 OTUD7BQ6GQQ9 843 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 TOGARAM2Q6ZUX3 1019 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 G2E3Q7L622 706 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 EXOC8Q8IYI6 725 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 RIC8AQ9NPQ8 531 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 GGA2Q9UJY4 613 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 SYCP2Q9BX26 1530 aa5.47□□□□□ -1.53
PCDH9-203ENST00000456367 HSPA1LP34931 641 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms