RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CNNM2Q9H8M5 875 aa21.02■□□□□ 0.96
MSH6-207ENST00000456246 ZNF536O15090 1300 aa21.02■□□□□ 0.95
MSH6-207ENST00000456246 NEDD4P46934 1319 aa21.02■□□□□ 0.95
MSH6-207ENST00000456246 A0A1W2PPC1 479 aa21.01■□□□□ 0.95
MSH6-207ENST00000456246 RARBP10826 455 aa21.01■□□□□ 0.95
MSH6-207ENST00000456246 AKR1A1P14550 325 aa21.01■□□□□ 0.95
MSH6-207ENST00000456246 PRAMEF19Q5SWL8 479 aa21.01■□□□□ 0.95
MSH6-207ENST00000456246 RNF146Q9NTX7 359 aa21.01■□□□□ 0.95
MSH6-207ENST00000456246 MTMR7Q9Y216 660 aa21.01■□□□□ 0.95
MSH6-207ENST00000456246 PDHBP11177 359 aa21■□□□□ 0.95
MSH6-207ENST00000456246 SYDE2Q5VT97 1194 aa21■□□□□ 0.95
MSH6-207ENST00000456246 KRT23Q9C075 422 aa21■□□□□ 0.95
MSH6-207ENST00000456246 SENP6Q9GZR1 1112 aaPredicted RBP21■□□□□ 0.95
MSH6-207ENST00000456246 RANBP17Q9H2T7 1088 aaKnown RBP21■□□□□ 0.95
MSH6-207ENST00000456246 PRO3102Q9H379 93 aa21■□□□□ 0.95
MSH6-207ENST00000456246 HOMER2Q9NSB8 354 aa21■□□□□ 0.95
MSH6-207ENST00000456246 ICAM1P05362 532 aa20.99■□□□□ 0.95
MSH6-207ENST00000456246 ZNF865P0CJ78 1059 aaPredicted RBP20.99■□□□□ 0.95
MSH6-207ENST00000456246 CHMP4CQ96CF2 233 aa20.99■□□□□ 0.95
MSH6-207ENST00000456246 AGBL1Q96MI9 1066 aa20.99■□□□□ 0.95
MSH6-207ENST00000456246 TRERF1Q96PN7 1200 aa20.99■□□□□ 0.95
MSH6-207ENST00000456246 XPNPEP3Q9NQH7 507 aa20.99■□□□□ 0.95
MSH6-207ENST00000456246 CCPG1Q9ULG6 757 aa20.99■□□□□ 0.95
MSH6-207ENST00000456246 POTEB2H3BUK9 544 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 KDM4AO75164 1064 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 SNHG28P0DPA3 235 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 ALAS1P13196 640 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 ZNF543Q08ER8 600 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 LRRC26Q2I0M4 334 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 GPATCH4Q5T3I0 446 aaKnown RBP20.98■□□□□ 0.95
MSH6-207ENST00000456246 ANO1Q5XXA6 986 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 CCDC174Q6PII3 467 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 RASGRP2Q7LDG7 609 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 RNF180Q86T96 592 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 ABHD16BQ9H3Z7 469 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 A1CFQ9NQ94 594 aaKnown RBP20.98■□□□□ 0.95
MSH6-207ENST00000456246 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
MSH6-207ENST00000456246 FAM184BQ9ULE4 1060 aa20.98■□□□□ 0.95
MSH6-207ENST00000456246 LRRC41Q15345 812 aa20.97■□□□□ 0.95
MSH6-207ENST00000456246 GJC2Q5T442 439 aaPredicted RBP20.97■□□□□ 0.95
MSH6-207ENST00000456246 FAM133AQ8N9E0 248 aa20.97■□□□□ 0.95
MSH6-207ENST00000456246 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
MSH6-207ENST00000456246 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.97■□□□□ 0.95
MSH6-207ENST00000456246 SMCHD1A6NHR9 2005 aa20.97■□□□□ 0.95
MSH6-207ENST00000456246 RANBP2P49792 3224 aaKnown RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 B4E1Z4 1266 aa20.96■□□□□ 0.95
MSH6-207ENST00000456246 SNAI1O95863 264 aaPredicted RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 TAL1P17542 331 aaPredicted RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 CHMLP26374 656 aa20.96■□□□□ 0.95
MSH6-207ENST00000456246 TTBK2Q6IQ55 1244 aa20.96■□□□□ 0.95
MSH6-207ENST00000456246 ZSCAN10Q96SZ4 725 aaPredicted RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 UBAC1Q9BSL1 405 aa20.96■□□□□ 0.95
MSH6-207ENST00000456246 KAT14Q9H8E8 782 aa20.96■□□□□ 0.95
MSH6-207ENST00000456246 ZHX1Q9UKY1 873 aaPredicted RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 ZMYND8Q9ULU4 1186 aaPredicted RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 FRMPD2Q68DX3 1309 aaPredicted RBP20.96■□□□□ 0.95
MSH6-207ENST00000456246 ASB14A6NK59 587 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 MYCNP04198 464 aaPredicted RBP20.95■□□□□ 0.94
MSH6-207ENST00000456246 BMP8BP34820 402 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 SLC16A2P36021 539 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 FXR1P51114 621 aaKnown RBP eCLIP20.95■□□□□ 0.94
MSH6-207ENST00000456246 TRDNQ13061 729 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 ACVR2BQ13705 512 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 ARMCX2Q7L311 632 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 PNMA1Q8ND90 353 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 FGD4Q96M96 766 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 GDF15Q99988 308 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 ZKSCAN3Q9BRR0 538 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 IL25Q9H293 177 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 GPCPD1Q9NPB8 672 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 U3KPZ7 1027 aaPredicted RBP20.95■□□□□ 0.94
MSH6-207ENST00000456246 WDR19Q8NEZ3 1342 aa20.95■□□□□ 0.94
MSH6-207ENST00000456246 CYP39A1Q9NYL5 469 aa20.94■□□□□ 0.94
MSH6-207ENST00000456246 ZSWIM5Q9P217 1185 aa20.94■□□□□ 0.94
MSH6-207ENST00000456246 PHF24Q9UPV7 400 aa20.94■□□□□ 0.94
MSH6-207ENST00000456246 TNKSO95271 1327 aa20.94■□□□□ 0.94
MSH6-207ENST00000456246 LOC102724159A0A0B4J2E5 919 aa20.93■□□□□ 0.94
MSH6-207ENST00000456246 DUSP11O75319 330 aaKnown RBP20.93■□□□□ 0.94
MSH6-207ENST00000456246 ATN1P54259 1190 aaPredicted RBP20.93■□□□□ 0.94
MSH6-207ENST00000456246 SNAP25P60880 206 aa20.93■□□□□ 0.94
MSH6-207ENST00000456246 PWP2Q15269 919 aaKnown RBP20.93■□□□□ 0.94
MSH6-207ENST00000456246 C1orf53Q5VUE5 145 aa20.93■□□□□ 0.94
MSH6-207ENST00000456246 CCDC144CPQ8IYA2 1237 aa20.93■□□□□ 0.94
MSH6-207ENST00000456246 ENAHQ8N8S7 591 aaPredicted RBP20.93■□□□□ 0.94
MSH6-207ENST00000456246 TSEN34Q9BSV6 310 aaKnown RBP20.93■□□□□ 0.94
MSH6-207ENST00000456246 SPC25Q9HBM1 224 aa20.93■□□□□ 0.94
MSH6-207ENST00000456246 MCM3APO60318 1980 aa20.93■□□□□ 0.94
MSH6-207ENST00000456246 SGSM2O43147 1006 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 ADAMTS4O75173 837 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 PGK1P00558 417 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 SYN1P17600 705 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 RTP1P59025 263 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 CNTN2Q02246 1040 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 SNX17Q15036 470 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 ASPRV1Q53RT3 343 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 MUM1L1Q5H9M0 696 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 NSMFQ6X4W1 530 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 SLC39A5Q6ZMH5 540 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 ADD3Q9UEY8 706 aaKnown RBP20.92■□□□□ 0.94
MSH6-207ENST00000456246 PRKAG2Q9UGJ0 569 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms