RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 RBPJLQ9UBG7 517 aa12.45□□□□□ -0.42
SYPL1-202ENST00000455385 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
SYPL1-202ENST00000455385 ZBTB5O15062 677 aa12.44□□□□□ -0.42
SYPL1-202ENST00000455385 CNMDO75829 334 aa12.44□□□□□ -0.42
SYPL1-202ENST00000455385 TMEM132BQ14DG7 1078 aa12.44□□□□□ -0.42
SYPL1-202ENST00000455385 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
SYPL1-202ENST00000455385 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
SYPL1-202ENST00000455385 RRP36Q96EU6 259 aaKnown RBP12.44□□□□□ -0.42
SYPL1-202ENST00000455385 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
SYPL1-202ENST00000455385 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
SYPL1-202ENST00000455385 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 PNMA6FA0A0J9YX94 578 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 CDKL5O76039 1030 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 Q3C1V9 767 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 CPXCR1Q8N123 301 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 RAVER2Q9HCJ3 691 aaKnown RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 GJB4Q9NTQ9 266 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 ZBED4O75132 1171 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 GJB2P29033 226 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 TRIM22Q8IYM9 498 aa12.43□□□□□ -0.42
SYPL1-202ENST00000455385 GPKOWQ92917 476 aaPredicted RBP eCLIP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.43□□□□□ -0.42
SYPL1-202ENST00000455385 DEXIO95424 95 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 WWC2Q6AWC2 1192 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
SYPL1-202ENST00000455385 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
SYPL1-202ENST00000455385 COA7Q96BR5 231 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 PAGR1Q9BTK6 254 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 SMC3Q9UQE7 1217 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 RIPK3Q9Y572 518 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 ADGRA2Q96PE1 1338 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 MYH6P13533 1939 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 FDX1P10109 184 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 SCG2P13521 617 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 AKAP17AQ02040 695 aaKnown RBP12.42□□□□□ -0.42
SYPL1-202ENST00000455385 CRHR2Q13324 411 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 FBXO11Q86XK2 927 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 PARK7Q99497 189 aaKnown RBP12.42□□□□□ -0.42
SYPL1-202ENST00000455385 RABGAP1Q9Y3P9 1069 aa12.42□□□□□ -0.42
SYPL1-202ENST00000455385 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 CA12O43570 354 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 ICAM1P05362 532 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 HMGN5P82970 282 aaKnown RBP12.41□□□□□ -0.42
SYPL1-202ENST00000455385 USH1GQ495M9 461 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 ANKRD13CQ8N6S4 541 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 RNF186Q9NXI6 227 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 SEC63Q9UGP8 760 aaKnown RBP12.41□□□□□ -0.42
SYPL1-202ENST00000455385 CPA4Q9UI42 421 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 PCDHA1Q9Y5I3 950 aa12.41□□□□□ -0.42
SYPL1-202ENST00000455385 A0A0G2JMZ2 1700 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 TLR2O60603 784 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
SYPL1-202ENST00000455385 STAT3P40763 770 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
SYPL1-202ENST00000455385 PLS1Q14651 629 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 C17orf99Q6UX52 265 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 BARHL2Q9NY43 387 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 STXBP3O00186 592 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 TRPA1O75762 1119 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 TBC1D8O95759 1140 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 ALDH1A1P00352 501 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 BCRP11274 1271 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 FOSBP53539 338 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 OAZ1P54368 228 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 ERVK-24P63145 666 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
SYPL1-202ENST00000455385 MOV10L1Q9BXT6 1211 aaKnown RBP12.4□□□□□ -0.42
SYPL1-202ENST00000455385 SPATC1LQ9H0A9 340 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 ZFYVE28Q9HCC9 887 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
SYPL1-202ENST00000455385 MORF4L1Q9UBU8 362 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 CCPG1Q9ULG6 757 aa12.4□□□□□ -0.42
SYPL1-202ENST00000455385 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
SYPL1-202ENST00000455385 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.43
SYPL1-202ENST00000455385 OPLAHO14841 1288 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 MUM1L1Q5H9M0 696 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 CLEC4DQ8WXI8 215 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 TBC1D5Q92609 795 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
SYPL1-202ENST00000455385 TEX13BQ9BXU2 312 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 ALAS1P13196 640 aa12.39□□□□□ -0.43
SYPL1-202ENST00000455385 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms