RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 OXCT2Q9BYC2 517 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 CAAP1Q9H8G2 361 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 RTCBQ9Y3I0 505 aaKnown RBP6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 COL15A1P39059 1388 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 ANKRD36CQ5JPF3 1778 aa6.26□□□□□ -1.41
HMGB1P4-201ENST00000455362 C4BP0C0L5 1744 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 SRGAP3O43295 1099 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 DDAH1O94760 285 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 PCCAP05165 728 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 SMPD1P17405 629 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 LMNB1P20700 586 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 GPTP24298 496 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 STAT3P40763 770 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 FOXO4P98177 505 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 PPP2R5EQ16537 467 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 C4orf17Q53FE4 359 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 TRAPPC3LQ5T215 181 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 ANKRD45Q5TZF3 282 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 KIAA0319Q5VV43 1072 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 CHD1LQ86WJ1 897 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 AMIGO3Q86WK7 504 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 NIM1KQ8IY84 436 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 SAMD3Q8N6K7 520 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 C1orf127Q8N9H9 656 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZBTB38Q8NAP3 1195 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZSWIM2Q8NEG5 633 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 FAM89AQ96GI7 184 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 FAM126AQ9BYI3 521 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 MAF1Q9H063 256 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 BICC1Q9H694 974 aaKnown RBP6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 NARFQ9UHQ1 456 aa6.25□□□□□ -1.41
HMGB1P4-201ENST00000455362 UBR3Q6ZT12 1888 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 CCDC189A1A4V9 331 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 TLR3O15455 904 aaKnown RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 RASGRP1O95267 797 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 GJB6O95452 261 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 CES1P23141 567 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZNF165P49910 485 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 TRIP4Q15650 581 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 CTC1Q2NKJ3 1217 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 RABL6Q3YEC7 729 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 PARP10Q53GL7 1025 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 TM4SF20Q53R12 229 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 SYCP2LQ5T4T6 812 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 SUSD4Q5VX71 490 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 LMBR1LQ6UX01 489 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 TPTE2Q6XPS3 522 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 THNSL2Q86YJ6 484 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 SYNE4Q8N205 404 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 JMYQ8N9B5 988 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 GLIS3Q8NEA6 775 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 ATL2Q8NHH9 583 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 SNIP1Q8TAD8 396 aaKnown RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 NINJ1Q92982 152 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 IL17RAQ96F46 866 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 PLA2G12BQ9BX93 195 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 GRIP2Q9C0E4 1043 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 CEP44Q9C0F1 390 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 CHRDQ9H2X0 955 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 GNL3LQ9NVN8 582 aaKnown RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 SRP68Q9UHB9 627 aaKnown RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 TRMT112Q9UI30 125 aaKnown RBP6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZNF652Q9Y2D9 606 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 UBN2Q6ZU65 1347 aa6.24□□□□□ -1.41
HMGB1P4-201ENST00000455362 BCORQ6W2J9 1755 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 TNS1Q9HBL0 1735 aaKnown RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 A0A1W2PP55 124 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 J3QL48 77 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 IRS4O14654 1257 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 SURF6O75683 361 aaKnown RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 UPP2O95045 317 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 CSF1RP07333 972 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 RFC4P35249 363 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 RFX5P48382 616 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 RGS3P49796 1198 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 RNF144AP50876 292 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 SETQ01105 290 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 HLTFQ14527 1009 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 DHX8Q14562 1220 aaKnown RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 LAPTM4AQ15012 233 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 ARSJQ5FYB0 599 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 TTBK2Q6IQ55 1244 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 MYO1HQ8N1T3 1032 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 ST13P5Q8NFI4 369 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 CAMKK2Q96RR4 588 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 TSEN34Q9BSV6 310 aaKnown RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 UTP14AQ9BVJ6 771 aaKnown RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZFYVE1Q9HBF4 777 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 ARNT2Q9HBZ2 717 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 POLMQ9NP87 494 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZMYM5Q9UJ78 669 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 NIP7Q9Y221 180 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 EXOC6BQ9Y2D4 811 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 GJA3Q9Y6H8 435 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 MYH3P11055 1940 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 CDHR2Q9BYE9 1310 aa6.23□□□□□ -1.41
HMGB1P4-201ENST00000455362 RGPD3A6NKT7 1758 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms