RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 DSG3P32926 999 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 RESTQ13127 1097 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 COG2Q14746 738 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 HOMER1Q86YM7 354 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 RASAL3Q86YV0 1011 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
LINC00963-208ENST00000454968 SLC45A1Q9Y2W3 748 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 ZNF536O15090 1300 aa19.2■□□□□ 0.66
LINC00963-208ENST00000454968 VPS37CA5D8V6 355 aaPredicted RBP19.19■□□□□ 0.66
LINC00963-208ENST00000454968 TMEM88BA6NKF7 163 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 H3BQV1 296 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 ATP2A1O14983 1001 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 FLOT1O75955 427 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 GTF2A2P52657 109 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 KIF23Q02241 960 aaPredicted RBP19.19■□□□□ 0.66
LINC00963-208ENST00000454968 IFFO2Q5TF58 517 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 CCDC148Q8NFR7 591 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 TNFRSF25Q93038 417 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 AMNQ9BXJ7 453 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
LINC00963-208ENST00000454968 ZSCAN16Q9H4T2 348 aaPredicted RBP19.19■□□□□ 0.66
LINC00963-208ENST00000454968 RBBP6Q7Z6E9 1792 aaKnown RBP19.18■□□□□ 0.66
LINC00963-208ENST00000454968 VWA5AO00534 786 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 CETPP11597 493 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 OAZ1P54368 228 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 TRAF1Q13077 416 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
LINC00963-208ENST00000454968 TRIM29Q14134 588 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 RGMBQ6NW40 437 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 CCDC12Q8WUD4 166 aaPredicted RBP19.18■□□□□ 0.66
LINC00963-208ENST00000454968 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
LINC00963-208ENST00000454968 HOXC10Q9NYD6 342 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 PNMA2Q9UL42 364 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 KCNJ14Q9UNX9 436 aa19.18■□□□□ 0.66
LINC00963-208ENST00000454968 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
LINC00963-208ENST00000454968 ICAM1P05362 532 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 SLC10A3P09131 477 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 CALML3P27482 149 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 GUCY1B3Q02153 619 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 POTEEQ6S8J3 1075 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 FBXO11Q86XK2 927 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 TNPO1Q92973 898 aaKnown RBP19.17■□□□□ 0.66
LINC00963-208ENST00000454968 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
LINC00963-208ENST00000454968 FAM155AB1AL88 458 aaPredicted RBP19.17■□□□□ 0.66
LINC00963-208ENST00000454968 GHRHRQ02643 423 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 DIS3L2Q8IYB7 885 aaKnown RBP19.17■□□□□ 0.66
LINC00963-208ENST00000454968 BRI3BPQ8WY22 251 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 COA7Q96BR5 231 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 ATG4CQ96DT6 458 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 ZNF214Q9UL59 606 aaPredicted RBP19.17■□□□□ 0.66
LINC00963-208ENST00000454968 PCDHA4Q9UN74 947 aa19.17■□□□□ 0.66
LINC00963-208ENST00000454968 KIF28PB7ZC32 967 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 OPLAHO14841 1288 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 NAPAP54920 295 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 PABPC4Q13310 644 aaKnown RBP eCLIP19.16■□□□□ 0.66
LINC00963-208ENST00000454968 GADL1Q6ZQY3 521 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 BRAPQ7Z569 592 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 ANKRD23Q86SG2 305 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 PCDHA1Q9Y5I3 950 aa19.16■□□□□ 0.66
LINC00963-208ENST00000454968 BTBD18B2RXH4 712 aa19.15■□□□□ 0.66
LINC00963-208ENST00000454968 GNA11P29992 359 aa19.15■□□□□ 0.66
LINC00963-208ENST00000454968 CLK2P49760 499 aaKnown RBP19.15■□□□□ 0.66
LINC00963-208ENST00000454968 ZNF157P51786 506 aaPredicted RBP19.15■□□□□ 0.66
LINC00963-208ENST00000454968 FOSBP53539 338 aa19.15■□□□□ 0.66
LINC00963-208ENST00000454968 SNAP25P60880 206 aa19.15■□□□□ 0.66
LINC00963-208ENST00000454968 SAFBQ15424 915 aaKnown RBP eCLIP19.15■□□□□ 0.66
LINC00963-208ENST00000454968 MB21D1Q8N884 522 aa19.15■□□□□ 0.66
LINC00963-208ENST00000454968 ASCC2Q9H1I8 757 aaPredicted RBP19.15■□□□□ 0.66
LINC00963-208ENST00000454968 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
LINC00963-208ENST00000454968 RIC8AQ9NPQ8 531 aa19.15■□□□□ 0.66
LINC00963-208ENST00000454968 ADAMTS3O15072 1205 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 KRT2P35908 639 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 NLRP5P59047 1200 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 FERMT3Q86UX7 667 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 BLIDQ8IZY5 108 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 OXER1Q8TDS5 423 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 CCDC102AQ96A19 550 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 PTPN18Q99952 460 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 MAF1Q9H063 256 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 GLT8D2Q9H1C3 349 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 C6orf50Q9HD87 102 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 ATP6V1DQ9Y5K8 247 aa19.14■□□□□ 0.65
LINC00963-208ENST00000454968 ABCB11O95342 1321 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 CCL15-CCL14A0A0B4J2E2 113 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 SMCO2A6NFE2 343 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 MANSC4A6NHS7 340 aaPredicted RBP19.13■□□□□ 0.65
LINC00963-208ENST00000454968 BTBD19C9JJ37 291 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 PIK3CDO00329 1044 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 ZBED4O75132 1171 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 CCL15Q16663 113 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 P2RX7Q99572 595 aaKnown RBP19.13■□□□□ 0.65
LINC00963-208ENST00000454968 CREBZFQ9NS37 354 aa19.13■□□□□ 0.65
LINC00963-208ENST00000454968 RASSF10A6NK89 507 aa19.12■□□□□ 0.65
LINC00963-208ENST00000454968 APLP1P51693 650 aa19.12■□□□□ 0.65
LINC00963-208ENST00000454968 HERVK_113P62684 666 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms