RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
CLCN4-204ENST00000454850 MTIF3Q9H2K0 278 aaKnown RBP11.9□□□□□ -0.5
CLCN4-204ENST00000454850 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
CLCN4-204ENST00000454850 DNAJC25-GNG10A0A024R161 153 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 FGBP02675 491 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 IFIT2P09913 472 aaKnown RBP11.89□□□□□ -0.51
CLCN4-204ENST00000454850 MYOGP15173 224 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 ADD2P35612 726 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 CCL23P55773 120 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 GJA9P57773 515 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 TFF2Q03403 129 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
CLCN4-204ENST00000454850 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 ARMCX2Q7L311 632 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 KIFC2Q96AC6 838 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
CLCN4-204ENST00000454850 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 RAVER2Q9HCJ3 691 aaKnown RBP11.89□□□□□ -0.51
CLCN4-204ENST00000454850 HOMER2Q9NSB8 354 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 PAG1Q9NWQ8 432 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 SLC4A4Q9Y6R1 1079 aa11.89□□□□□ -0.51
CLCN4-204ENST00000454850 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 LCTP09848 1927 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 ZBED4O75132 1171 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 NDUFB10O96000 172 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 CXCL17Q6UXB2 119 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
CLCN4-204ENST00000454850 CCDC144CPQ8IYA2 1237 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
CLCN4-204ENST00000454850 FGD4Q96M96 766 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
CLCN4-204ENST00000454850 TRIP12Q14669 1992 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 F5H6K3 240 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 CTAGE5O15320 804 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 CD4P01730 458 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 PTGS1P23219 599 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 KCNQ1P51787 676 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 KLRC3Q07444 240 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 HSP90AB4PQ58FF6 505 aa11.87□□□□□ -0.51
CLCN4-204ENST00000454850 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-204ENST00000454850 ASTN1O14525 1302 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 TET1Q8NFU7 2136 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 BMP1P13497 986 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 SCLYQ96I15 445 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
CLCN4-204ENST00000454850 C1QTNF1Q9BXJ1 281 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 TRPV6Q9H1D0 765 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 WNT8AQ9H1J5 351 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 MKNK2Q9HBH9 465 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 CLIP2Q9UDT6 1046 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 SLC4A7Q9Y6M7 1214 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 DDX49Q9Y6V7 483 aaKnown RBP11.86□□□□□ -0.51
CLCN4-204ENST00000454850 TANC1Q9C0D5 1861 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
CLCN4-204ENST00000454850 RFXAPO00287 272 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 RASA1P20936 1047 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 PSMC6P62333 389 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 ITGA7Q13683 1181 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 LRRC47Q8N1G4 583 aaKnown RBP11.85□□□□□ -0.51
CLCN4-204ENST00000454850 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 SLC38A10Q9HBR0 1119 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
CLCN4-204ENST00000454850 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
CLCN4-204ENST00000454850 MINDY4BA8MYZ0 360 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 ATP2A1O14983 1001 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 B4GALT4O60513 344 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
CLCN4-204ENST00000454850 FSCN1Q16658 493 aaKnown RBP11.84□□□□□ -0.51
CLCN4-204ENST00000454850 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 CHST13Q8NET6 341 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 PUS7LQ9H0K6 701 aaKnown RBP11.84□□□□□ -0.51
CLCN4-204ENST00000454850 FEM1BQ9UK73 627 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 PCDHA11Q9Y5I1 949 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
CLCN4-204ENST00000454850 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
CLCN4-204ENST00000454850 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms