RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 CTAGE5O15320 804 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 RAD21O60216 631 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 ZEB2O60315 1214 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 BCAR3O75815 825 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 CCL23P55773 120 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 ITGA7Q13683 1181 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 C16orf86Q6ZW13 317 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 ANKRD35Q8N283 1001 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
USP41-202ENST00000454608 HLA-CQ95604 372 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 NOC4LQ9BVI4 516 aaKnown RBP12.54□□□□□ -0.4
USP41-202ENST00000454608 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
USP41-202ENST00000454608 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 MYH4Q9Y623 1939 aa12.54□□□□□ -0.4
USP41-202ENST00000454608 MYH7P12883 1935 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 TCRBV5S4A2TA0A5A2 114 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 MYOGP15173 224 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 TNFAIP2Q03169 654 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 C12orf60Q5U649 245 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 CXCL17Q6UXB2 119 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 CHST13Q8NET6 341 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
USP41-202ENST00000454608 PI4K2BG5E9Z4 385 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 ZBED4O75132 1171 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 CA3P07451 260 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 ACTN1P12814 892 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 OAZ1P54368 228 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 BEX3Q00994 111 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 AACSQ86V21 672 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 ALYREFQ86V81 257 aaKnown RBP12.52□□□□□ -0.41
USP41-202ENST00000454608 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 CPXCR1Q8N123 301 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 PHOSPHO2Q8TCD6 241 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP41-202ENST00000454608 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
USP41-202ENST00000454608 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 FGD4Q96M96 766 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 SLC9A7Q96T83 725 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
USP41-202ENST00000454608 Q9Y3F1 56 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 SCN5AQ14524 2016 aa12.52□□□□□ -0.41
USP41-202ENST00000454608 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 RFXAPO00287 272 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 B4GALT4O60513 344 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
USP41-202ENST00000454608 NOL8Q76FK4 1167 aaKnown RBP12.51□□□□□ -0.41
USP41-202ENST00000454608 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 AGBL1Q96MI9 1066 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
USP41-202ENST00000454608 ASB14A6NK59 587 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 PRR33A8MZF0 331 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 USP17L21D6R901 530 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 F5H6K3 240 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 SMIM22K7EJ46 135 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 FDX1P10109 184 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 RFC2P35250 354 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 KLRC3Q07444 240 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 SCLYQ96I15 445 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 SLC38A10Q9HBR0 1119 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 LMCD1Q9NZU5 365 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 TNNQ9UQP3 1299 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 ASTN1O14525 1302 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 GRIN2DO15399 1336 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 COL4A4P53420 1690 aaPredicted RBP12.5□□□□□ -0.41
USP41-202ENST00000454608 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
USP41-202ENST00000454608 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
USP41-202ENST00000454608 GOLIM4O00461 696 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 PRKAB2O43741 272 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 MBD4O95243 580 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 ZKSCAN2Q63HK3 967 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 IQSEC1Q6DN90 963 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 ARNTL2Q8WYA1 636 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP41-202ENST00000454608 VWCEQ96DN2 955 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
USP41-202ENST00000454608 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 RAVER2Q9HCJ3 691 aaKnown RBP12.49□□□□□ -0.41
USP41-202ENST00000454608 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
USP41-202ENST00000454608 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
USP41-202ENST00000454608 CYP2D7A0A087X1C5 515 aa12.48□□□□□ -0.41
USP41-202ENST00000454608 FAM86C2PA6NEL3 165 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms