RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ZBTB40Q9NUA8 1239 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TRANK1O15050 2925 aa7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TCF20Q9UGU0 1960 aaKnown RBP7.18□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TANC1Q9C0D5 1861 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DNAJC25-GNG10A0A024R161 153 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 IGKV6D-41A0A0C4DH26 115 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DCDC2CA8MYV0 355 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 F5H6K3 240 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 NMT2O60551 498 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 IGSF3O75054 1194 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 HMMRO75330 724 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ASGR1P07306 291 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MYOGP15173 224 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RABGGTBP53611 331 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KLRC3Q07444 240 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 UBE3CQ15386 1083 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCDC174Q6PII3 467 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 NOL8Q76FK4 1167 aaKnown RBP7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ANKRD33Q7Z3H0 272 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 FAM126BQ8IXS8 530 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ANKRD35Q8N283 1001 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 VTI1AQ96AJ9 217 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 AGBL1Q96MI9 1066 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 STRBPQ96SI9 672 aaKnown RBP7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 NKX2-4Q9H2Z4 354 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CLIP2Q9UDT6 1046 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 YBX2Q9Y2T7 364 aaKnown RBP7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 GRIN2DO15399 1336 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SYNGAP1Q96PV0 1343 aa7.17□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ARHGEF15O94989 841 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TIMP1P01033 207 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 APPP05067 770 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 IGFBP4P22692 258 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CCL23P55773 120 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ACVR2BQ13705 512 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MUM1L1Q5H9M0 696 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 GNASQ5JWF2 1037 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TMEM240Q5SV17 173 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RASIP1Q5U651 963 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ZNF365Q70YC5 407 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KCTD1Q719H9 257 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 OTOP2Q7RTS6 562 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SPRED2Q7Z698 418 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TLK2Q86UE8 772 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 GLT1D1Q96MS3 346 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 LRRCC1Q9C099 1032 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TRPV6Q9H1D0 765 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 WNT8AQ9H1J5 351 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MKNK2Q9HBH9 465 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SLC38A10Q9HBR0 1119 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 A1CFQ9NQ94 594 aaKnown RBP7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 INCENPQ9NQS7 918 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PDGFCQ9NRA1 345 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RNF146Q9NTX7 359 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 NRBP1Q9UHY1 535 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 FAM184BQ9ULE4 1060 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DDX19BQ9UMR2 479 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CTDP1Q9Y5B0 961 aaPredicted RBP7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PLIN4Q96Q06 1357 aa7.16□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PTPRSQ13332 1948 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TMEM265A0A087WTH1 108 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 A0A0U1RQG5 324 aaPredicted RBP7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SOWAHBA6NEL2 793 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MOXD2PA6NHM9 499 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TMEM232C9JQI7 657 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 B4GALT4O60513 344 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 RAB11FIP3O75154 756 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DUSP11O75319 330 aaKnown RBP7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ALAS1P13196 640 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CST5P28325 142 aaPredicted RBP7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CDK7P50613 346 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TFF2Q03403 129 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 PPIGQ13427 754 aaKnown RBP eCLIP7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SLFN13Q68D06 897 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KRT40Q6A162 431 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MFSD5Q6N075 450 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MAMDC4Q6UXC1 1216 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SLC30A10Q6XR72 485 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 KBTBD3Q8NAB2 608 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ADAMTS19Q8TE59 1207 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 NUP133Q8WUM0 1156 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 APPBP2Q92624 585 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 SCLYQ96I15 445 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 UPF3AQ9H1J1 476 aaKnown RBP7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 HIPK3Q9H422 1215 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 CERS4Q9HA82 394 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ECHDC1Q9NTX5 307 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 MTMR4Q9NYA4 1195 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 THEGQ9P2T0 379 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 DIS3Q9Y2L1 958 aaKnown RBP7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ZNF536O15090 1300 aa7.15□□□□□ -1.26
HLA-DPA3-207ENST00000454398 TET1Q8NFU7 2136 aa7.15□□□□□ -1.27
HLA-DPA3-207ENST00000454398 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 EPOPA6NHQ4 379 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZBBXA8MT70 800 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms