RNA–Protein interactions for RNA: ENST00000454083.1

SPATA13-208, Transcript of spermatogenesis associated 13, human

TSL 3

Gene SPATA13, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPATA13-208	ENST00000454083	PDIA3	P30101	505 aa	Known RBP	13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	CCDC178	Q5BJE1	867 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	MAP1S	Q66K74	1059 aa	Predicted RBP	13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	SYNE3	Q6ZMZ3	975 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	TMTC2	Q8N394	836 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	AGXT2	Q9BYV1	514 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	TCP11L1	Q9NUJ3	509 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	CLIP2	Q9UDT6	1046 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	STX8	Q9UNK0	236 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	MTMR7	Q9Y216	660 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	PPP2R3B	Q9Y5P8	575 aa		13.88	□□□□□ -0.19
SPATA13-208	ENST00000454083	RXRA	P19793	462 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	LIFR	P42702	1097 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	MAP3K10	Q02779	954 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	SEPT2	Q15019	361 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	RAB3GAP1	Q15042	981 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	DCAF15	Q66K64	600 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	RCSD1	Q6JBY9	416 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	CDC37L1	Q7L3B6	337 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	CLEC10A	Q8IUN9	316 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	CCDC83	Q8IWF9	413 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	CCDC144CP	Q8IYA2	1237 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	FBXL16	Q8N461	479 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	NUP133	Q8WUM0	1156 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	HOOK2	Q96ED9	719 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZNF274	Q96GC6	653 aa	Predicted RBP	13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	CEP95	Q96GE4	821 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	MTA3	Q9BTC8	594 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	MYL10	Q9BUA6	226 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZNF341	Q9BYN7	854 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	SLK	Q9H2G2	1235 aa	Predicted RBP	13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	KAT14	Q9H8E8	782 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	SLC12A7	Q9Y666	1083 aa		13.87	□□□□□ -0.19
SPATA13-208	ENST00000454083	GOLGA8B	A8MQT2	603 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	PHF20L1	A8MW92	1017 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZBTB43	O43298	467 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	USP2	O75604	605 aa	Predicted RBP	13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	ALDH1A1	P00352	501 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	CTH	P32929	405 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	NT5C2	P49902	561 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	CATIP	Q7Z7H3	387 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	DGKH	Q86XP1	1220 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	CDCA5	Q96FF9	252 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	TMEM47	Q9BQJ4	181 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	NCOA5	Q9HCD5	579 aa	Known RBP	13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	POLR3E	Q9NVU0	708 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	MTMR4	Q9NYA4	1195 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	UTRN	P46939	3433 aa		13.86	□□□□□ -0.19
SPATA13-208	ENST00000454083	IGKV6D-41	A0A0C4DH26	115 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	TRAF5	O00463	557 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	PFKFB2	O60825	505 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	EEF2	P13639	858 aa	Known RBP	13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	INPP5B	P32019	993 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	GUCY1A2	P33402	732 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	CAP2	P40123	477 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	EVC	P57679	992 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	FMR1	Q06787	632 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	TMEM179	Q6ZVK1	233 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZNF654	Q8IZM8	581 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	ANKS1A	Q92625	1134 aa		13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZNF775	Q96BV0	537 aa	Predicted RBP	13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.85	□□□□□ -0.19
SPATA13-208	ENST00000454083	GOLGA8A	A7E2F4	631 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	RAD21	O60216	631 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	PPFIA3	O75145	1194 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	TOP1	P11387	765 aa	Known RBP	13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	METAP2	P50579	478 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	SCRN1	Q12765	414 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	CUL4A	Q13619	759 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	APOA5	Q6Q788	366 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	CCDC84	Q86UT8	332 aa	Predicted RBP	13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	SGMS1	Q86VZ5	419 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	MICU3	Q86XE3	530 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	SIAH1	Q8IUQ4	282 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	FAM117A	Q9C073	453 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	ZNF408	Q9H9D4	720 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	KANSL2	Q9H9L4	492 aa		13.84	□□□□□ -0.19
SPATA13-208	ENST00000454083	CTNND1	O60716	968 aa	Known RBP	13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	TTLL1	O95922	423 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	NF2	P35240	595 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	ADD1	P35611	737 aa	Known RBP	13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	ST3GAL1	Q11201	340 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	MOB2	Q70IA6	237 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	LDHD	Q86WU2	507 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	LRRC47	Q8N1G4	583 aa	Known RBP	13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	PNMA1	Q8ND90	353 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	WRNIP1	Q96S55	665 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	GMPR2	Q9P2T1	348 aa	Known RBP	13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	ZNF112	Q9UJU3	913 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	ZBTB21	Q9ULJ3	1066 aa		13.83	□□□□□ -0.2
SPATA13-208	ENST00000454083	MYH4	Q9Y623	1939 aa		13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	PPP1R12B	O60237	982 aa	Predicted RBP	13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	CDC27	P30260	824 aa		13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	ICA1	Q05084	483 aa		13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	RTN1	Q16799	776 aa		13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	CCDC82	Q8N4S0	544 aa		13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	FANCB	Q8NB91	859 aa		13.82	□□□□□ -0.2
SPATA13-208	ENST00000454083	ACER1	Q8TDN7	264 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms