RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 LBX2Q6XYB7 198 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 DHX32Q7L7V1 743 aaKnown RBP9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 GPT2Q8TD30 523 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 FAM161BQ96MY7 647 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 ARHGEF10LQ9HCE6 1279 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 FBXO28Q9NVF7 368 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 CTNNA3Q9UI47 895 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 SLC4A4Q9Y6R1 1079 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 VCANP13611 3396 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 MYH4Q9Y623 1939 aa9.82□□□□□ -0.84
RPSAP54-201ENST00000454001 USP17L12C9JPN9 530 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 USP17L21D6R901 530 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 E7EWF7 191 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 DNM1LO00429 736 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 DLL1O00548 723 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 GPAA1O43292 621 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 HOXC6P09630 235 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 MRE11P49959 708 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 EXOSC10Q01780 885 aaKnown RBP9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 UBE3CQ15386 1083 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 LRIT3Q3SXY7 679 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 TMED8Q6PL24 325 aaPredicted RBP9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 Q6ZUG5 572 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 AMOTL1Q8IY63 956 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 TMEM87AQ8NBN3 555 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 LPAR1Q92633 364 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 GTF3C6Q969F1 213 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 FERMT2Q96AC1 680 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 LENG1Q96BZ8 264 aaPredicted RBP9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 LBHD1Q9BQE6 289 aaPredicted RBP9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 AGXT2Q9BYV1 514 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 PUS7LQ9H0K6 701 aaKnown RBP9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 VCPKMTQ9H867 229 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 SWAP70Q9UH65 585 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 SMCHD1A6NHR9 2005 aa9.81□□□□□ -0.84
RPSAP54-201ENST00000454001 GREB1LQ9C091 1923 aaPredicted RBP9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 KBTBD13C9JR72 458 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 MSCO60682 206 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 MBD3O95983 291 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 PGK2P07205 417 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 XRCC6P12956 609 aaKnown RBP eCLIP9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 EEF2P13639 858 aaKnown RBP9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 DSG3P32926 999 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 CDK8P49336 464 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 ZNF445P59923 1031 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 FAM47AQ5JRC9 791 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 CAVIN1Q6NZI2 390 aaKnown RBP9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 GAS2L3Q86XJ1 694 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 SIAH1Q8IUQ4 282 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 FBXL16Q8N461 479 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 BRF1Q92994 677 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 NUP88Q99567 741 aaPredicted RBP9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 SH2D4AQ9H788 454 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 HOXC10Q9NYD6 342 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 PRKAG2Q9UGJ0 569 aa9.8□□□□□ -0.84
RPSAP54-201ENST00000454001 MCM3APO60318 1980 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 WDR46O15213 610 aaKnown RBP9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 PFKFB2O60825 505 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 FGAP02671 866 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 PDCP20941 246 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 ADCYAP1R1P41586 468 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 IMMTQ16891 758 aaKnown RBP9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 TRIM60Q495X7 471 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 FAM83BQ5T0W9 1011 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 C12orf60Q5U649 245 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 OLFML2BQ68BL8 750 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 C16orf86Q6ZW13 317 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 MB21D1Q8N884 522 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 SHCBP1Q8NEM2 672 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 MAML3Q96JK9 1138 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 MMP19Q99542 508 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 LRRC2Q9BYS8 371 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 MROH8Q9H579 483 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 GRPEL1Q9HAV7 217 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 MTMR10Q9NXD2 777 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 BRPF3Q9ULD4 1205 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 TMX2Q9Y320 296 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 ATP6V1DQ9Y5K8 247 aa9.79□□□□□ -0.84
RPSAP54-201ENST00000454001 SEPT4O43236 478 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 STRNO43815 780 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 DTNBO60941 627 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 FCER1AP12319 257 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 TAL1P17542 331 aaPredicted RBP9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 NCLP19338 710 aaKnown RBP9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 SCRN1Q12765 414 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 STK3Q13188 491 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 ZSCAN23Q3MJ62 389 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 LARP1BQ659C4 914 aaKnown RBP9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 ARRDC4Q8NCT1 418 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 SMARCC2Q8TAQ2 1214 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 CHMP4CQ96CF2 233 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 LLPHQ9BRT6 129 aaKnown RBP9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 GOPCQ9HD26 462 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 SLC5A4Q9NY91 659 aa9.78□□□□□ -0.84
RPSAP54-201ENST00000454001 TMEM63CQ9P1W3 806 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms