RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PRODHO43272 600 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 SIGLEC6O43699 453 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 DLX3O60479 287 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 RAPGEF3O95398 923 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 WNT11O96014 354 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 FAM87AP0C7U9 286 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 ZNF865P0CJ78 1059 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 HOXC12P31275 282 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 GFRA1P56159 465 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 MAP4K2Q12851 820 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 NOL9Q5SY16 702 aaKnown RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 SFRP5Q5T4F7 317 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 THNSL2Q86YJ6 484 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 FIBCD1Q8N539 461 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 ENOX1Q8TC92 643 aaKnown RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 BTN2A2Q8WVV5 523 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 BRF1Q92994 677 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 PPP1R14AQ96A00 147 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 C1orf159Q96HA4 380 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 HEXIM2Q96MH2 286 aaKnown RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 IPO9Q96P70 1041 aaKnown RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 FMNL2Q96PY5 1086 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 IER2Q9BTL4 223 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 GOLGA2P5Q9HBQ8 144 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 PRDM5Q9NQX1 630 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 CYP26B1Q9NR63 512 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 INTS7Q9NVH2 962 aaKnown RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 GFOD1Q9NXC2 390 aa5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 TPX2Q9ULW0 747 aaKnown RBP5.32□□□□□ -1.56
HMGB1P15-201ENST00000453854 FAM170BA6NMN3 283 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 KCNH1O95259 989 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 SRFP11831 508 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 FOSL1P15407 271 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 POU3F3P20264 500 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 STAT3P40763 770 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 ANAPC15P60006 121 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 CYP4F3Q08477 520 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 GTF2IRD2BQ6EKJ0 949 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 TMC3Q7Z5M5 1100 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 ZAR1Q86SH2 424 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 GTF2IRD2Q86UP8 949 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 DHX37Q8IY37 1157 aaKnown RBP5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 ABI1Q8IZP0 508 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 GSTCDQ8NEC7 633 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 PIWIL2Q8TC59 973 aaKnown RBP5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 ATG3Q9NT62 314 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 GTF2IRD1Q9UHL9 959 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 ADGRE2Q9UHX3 823 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 KCNH3Q9ULD8 1083 aa5.31□□□□□ -1.56
HMGB1P15-201ENST00000453854 IRS4O14654 1257 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 PAX4O43316 350 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 NMIQ13287 307 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 SF1Q15637 639 aaKnown RBP5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 SLC35F1Q5T1Q4 408 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 KCTD13Q8WZ19 329 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 TBC1D32Q96NH3 1257 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 OSBPL1AQ9BXW6 950 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 GPR62Q9BZJ7 368 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 TRIM39Q9HCM9 518 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 CHST7Q9NS84 486 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 SF3B6Q9Y3B4 125 aaKnown RBP5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 CAPN6Q9Y6Q1 641 aa5.3□□□□□ -1.56
HMGB1P15-201ENST00000453854 SHISA3A0PJX4 238 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 FAM83GA6ND36 823 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 GSG1L2A8MUP6 293 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 PRR33A8MZF0 331 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 EFCAB14O75071 495 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 RAB11FIP3O75154 756 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 CPP00450 1065 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 GSNP06396 782 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 MYCLP1P12525 358 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 SDSP20132 328 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 CTSKP43235 329 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 GABREP78334 506 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 TNK2Q07912 1038 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 TESK1Q15569 626 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 NTRK3Q16288 839 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 RNF180Q86T96 592 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 DAGLBQ8NCG7 672 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 KREMEN2Q8NCW0 462 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 SLC7A14Q8TBB6 771 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 HDAC8Q9BY41 377 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 CAAP1Q9H8G2 361 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 MAGEC2Q9UBF1 373 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 CCDC39Q9UFE4 941 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 MAPRE3Q9UPY8 281 aa5.29□□□□□ -1.56
HMGB1P15-201ENST00000453854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 H0Y8X5 98 aa5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 PDE8AO60658 829 aa5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 DNAJC8O75937 253 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 CBX7O95931 251 aa5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 PRNPP04156 253 aa5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 ITIH2P19823 946 aa5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 POU3F2P20265 443 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 AMPD2Q01433 879 aa5.28□□□□□ -1.56
HMGB1P15-201ENST00000453854 PPP2R5DQ14738 602 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms