RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
CDC42EP3-203ENST00000453555 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 NEDD4P46934 1319 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 STRNO43815 780 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 COBLO75128 1261 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 ZBED4O75132 1171 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 SLC25A27O95847 323 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 CCND3P30281 292 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 IKQ13123 557 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 SNRNP48Q6IEG0 339 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 KCTD1Q719H9 257 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 RASGRP2Q7LDG7 609 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 RIOX2Q8IUF8 465 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 CPXCR1Q8N123 301 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 MMP19Q99542 508 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 DSCC1Q9BVC3 393 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 FEM1BQ9UK73 627 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
CDC42EP3-203ENST00000453555 SMCHD1A6NHR9 2005 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 FARP2O94887 1054 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 PGK2P07205 417 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 HOXC6P09630 235 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 FCER1AP12319 257 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 CHMLP26374 656 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 CYP2C19P33261 490 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 SLC1A4P43007 532 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 MAP3K21Q5TCX8 1036 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 ZKSCAN3Q9BRR0 538 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 RIPK3Q9Y572 518 aa11.16□□□□□ -0.62
CDC42EP3-203ENST00000453555 CNGA1P29973 690 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 STAT2P52630 851 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 SNAP25P60880 206 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 KCTD2Q14681 263 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 IMMTQ16891 758 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 CCDC96Q2M329 555 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 PRPF38BQ5VTL8 546 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 RCSD1Q6JBY9 416 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 DIS3LQ8TF46 1054 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 RUFY2Q8WXA3 655 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 DPF3Q92784 378 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 TMEM47Q9BQJ4 181 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 TEX13BQ9BXU2 312 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 SLC38A10Q9HBR0 1119 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 TCP11L1Q9NUJ3 509 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 MCM3APO60318 1980 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 MYH6P13533 1939 aa11.15□□□□□ -0.62
CDC42EP3-203ENST00000453555 B4E1Z4 1266 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 KDM4AO75164 1064 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 PCP11498 1178 aaKnown RBP11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 NOVP48745 357 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 PTH1RQ03431 593 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 CENPQQ7L2Z9 268 aaPredicted RBP11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 UBE2Q1Q7Z7E8 422 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 FAM160B2Q86V87 743 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 ABRAQ8N0Z2 381 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 ESR2Q92731 530 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 PAWRQ96IZ0 340 aaKnown RBP11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 SLC5A4Q9NY91 659 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 CTNNA3Q9UI47 895 aa11.14□□□□□ -0.63
CDC42EP3-203ENST00000453555 MKI67P46013 3256 aaKnown RBP11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 RAD50Q92878 1312 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 COPB2P35606 906 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 SLC16A2P36021 539 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 PRAMEF19Q5SWL8 479 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 CCDC174Q6PII3 467 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 DCAF4Q8WV16 495 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 DDX11Q96FC9 970 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 PRR12Q9ULL5 1215 aa11.13□□□□□ -0.63
CDC42EP3-203ENST00000453555 IGHA2P01877 340 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 CYBAP13498 195 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 CAPN2P17655 700 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 NECAB2Q7Z6G3 386 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 TTC14Q96N46 770 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
CDC42EP3-203ENST00000453555 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms