RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 KRT9P35527 623 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ERVK-24P63145 666 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 PPP2R2AP63151 447 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 PDE4BQ07343 736 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 KIF5AQ12840 1032 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 MAP3K12Q12852 859 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 TAF11Q15544 211 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 LONRF3Q496Y0 759 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 TTC39AQ5SRH9 613 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 KCTD16Q68DU8 428 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 C8orf74Q6P047 294 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 SHC4Q6S5L8 630 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 TSHZ1Q6ZSZ6 1077 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 APTXQ7Z2E3 356 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 AACSQ86V21 672 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 PNMA8AQ86V59 439 aaPredicted RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 RETREG2Q8NC44 543 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 TSEN2Q8NCE0 465 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 SPATA20Q8TB22 786 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 AIDAQ96BJ3 306 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CHMP6Q96FZ7 201 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 COG3Q96JB2 828 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CAPZA3Q96KX2 299 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 TRIM7Q9C029 511 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ATXN10Q9UBB4 475 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 LUC7L2Q9Y383 392 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 HYOU1Q9Y4L1 999 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 SLC4A7Q9Y6M7 1214 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ABCC1P33527 1531 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 DLG5Q8TDM6 1919 aa9.27□□□□□ -0.92
SMCO1-202ENST00000452776 A0A0D9SFI3 127 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 A0A1W2PQC6 194 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 TEX33O43247 280 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 ZMYND10O75800 440 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 DESP17661 470 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 HSPA9P38646 679 aaKnown RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 CDK17Q00537 523 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 KIF23Q02241 960 aaPredicted RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 ENOX2Q16206 610 aaKnown RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 TSNAXIP1Q2TAA8 658 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 SPDYCQ5MJ68 293 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 ASTLQ6HA08 431 aaPredicted RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 MYLK4Q86YV6 388 aaPredicted RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 CREG2Q8IUH2 290 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 FOXP4Q8IVH2 680 aaPredicted RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 TBC1D5Q92609 795 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 RMDN2Q96LZ7 410 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 RAB3IPQ96QF0 476 aaPredicted RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 DSCC1Q9BVC3 393 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 SAMSN1Q9NSI8 373 aaKnown RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 SAMD15Q9P1V8 674 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 PHF24Q9UPV7 400 aa9.27□□□□□ -0.93
SMCO1-202ENST00000452776 EDC4Q6P2E9 1401 aaKnown RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 CEP170BQ9Y4F5 1589 aaPredicted RBP9.27□□□□□ -0.93
SMCO1-202ENST00000452776 CPLX1O14810 134 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 N4BP3O15049 544 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 KIF4AO95239 1232 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FAM163BP0C2L3 166 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 BMP6P22004 513 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FMR1Q06787 632 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 CFAP221Q4G0U5 840 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 ANKRD20A2Q5SQ80 823 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 SLC9C2Q5TAH2 1124 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 ANKRD20A1Q5TYW2 823 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 ANKRD20A3Q5VUR7 823 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 MCM10Q7L590 875 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 N4BP2Q86UW6 1770 aaPredicted RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 RNF168Q8IYW5 571 aaPredicted RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FBF1Q8TES7 1133 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 AGAP11Q8TF27 550 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 MAIP1Q8WWC4 291 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 OPTNQ96CV9 577 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 RRP36Q96EU6 259 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 GSDMAQ96QA5 445 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 SEC62Q99442 399 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 DNAJC7Q99615 494 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 PYM1Q9BRP8 204 aaKnown RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 RAB17Q9H0T7 212 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 MMADHCQ9H3L0 296 aaPredicted RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 SLC12A6Q9UHW9 1150 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 CACNA1FO60840 1977 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 ATP7AQ04656 1500 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 ARAP3Q8WWN8 1544 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 A0A0G2JS52 829 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 GRID2IPA4D2P6 1211 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 ENC1O14682 589 aa9.26□□□□□ -0.93
SMCO1-202ENST00000452776 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
SMCO1-202ENST00000452776 KRT14P02533 472 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms