RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KRI1Q8N9T8 703 aaKnown RBP12.27□□□□□ -0.45
PKP4-206ENST00000452162 ANKS1AQ92625 1134 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 OPTNQ96CV9 577 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 DYNLL2Q96FJ2 89 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 ZNF830Q96NB3 372 aaPredicted RBP12.27□□□□□ -0.45
PKP4-206ENST00000452162 EHD4Q9H223 541 aa12.27□□□□□ -0.45
PKP4-206ENST00000452162 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.45
PKP4-206ENST00000452162 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
PKP4-206ENST00000452162 XBP1P17861 261 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 TFAP4Q01664 338 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 GABPAQ06546 454 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 NOGQ13253 232 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 MORC2Q9Y6X9 1032 aaPredicted RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 hCG_1642624A0A1W2PR95 340 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 CTNND1O60716 968 aaKnown RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 TPM3P06753 285 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 PTPREP23469 700 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 JAG1P78504 1218 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 NPY5RQ15761 445 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 NOL9Q5SY16 702 aaKnown RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 CCDC84Q86UT8 332 aaPredicted RBP12.26□□□□□ -0.45
PKP4-206ENST00000452162 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 SCYL3Q8IZE3 742 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 SLC44A5Q8NCS7 719 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 PCDHB6Q9Y5E3 794 aa12.26□□□□□ -0.45
PKP4-206ENST00000452162 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 GOLGA6L6A8MZA4 724 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 GOLGA6L19H0YKK7 550 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 CDC25BP30305 580 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 SHMT1P34896 483 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 KRT2P35908 639 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 MAP2K2P36507 400 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 CAP2P40123 477 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 DPCR1Q3MIW9 517 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 ERO1BQ86YB8 467 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 SPC24Q8NBT2 197 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 TNFRSF25Q93038 417 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 BPIFA3Q9BQP9 254 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 TRIM5Q9C035 493 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 TCP11L1Q9NUJ3 509 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 PTPRFP10586 1907 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 FAM205CA6NFA0 338 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 GDF11O95390 407 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 NLRP12P59046 1061 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 EARS2Q5JPH6 523 aaKnown RBP12.25□□□□□ -0.45
PKP4-206ENST00000452162 TATDN1Q6P1N9 297 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
PKP4-206ENST00000452162 AMOTL1Q8IY63 956 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 NAT10Q9H0A0 1025 aaKnown RBP12.25□□□□□ -0.45
PKP4-206ENST00000452162 CABP5Q9NP86 173 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 KCNH3Q9ULD8 1083 aa12.25□□□□□ -0.45
PKP4-206ENST00000452162 IRF6O14896 467 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 ZBTB48P10074 688 aaPredicted RBP12.24□□□□□ -0.45
PKP4-206ENST00000452162 PTPRAP18433 802 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 GRIN1Q05586 938 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 AOPEPQ8N6M6 819 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
PKP4-206ENST00000452162 PIBF1Q8WXW3 757 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 PICK1Q9NRD5 415 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 CEP131Q9UPN4 1083 aa12.24□□□□□ -0.45
PKP4-206ENST00000452162 BECN2A8MW95 431 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 RASA1P20936 1047 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 KIF5BP33176 963 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 PFKFB3Q16875 520 aaPredicted RBP12.23□□□□□ -0.45
PKP4-206ENST00000452162 ELOA2Q8IYF1 753 aaPredicted RBP12.23□□□□□ -0.45
PKP4-206ENST00000452162 MKNK2Q9HBH9 465 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 SRPRBQ9Y5M8 271 aaKnown RBP12.23□□□□□ -0.45
PKP4-206ENST00000452162 SCG2P13521 617 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 CDK8P49336 464 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 GRM4Q14833 912 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 KRBA2Q6ZNG9 492 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 C16orf86Q6ZW13 317 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 MRFAP1L1Q96HT8 127 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 ZHX2Q9Y6X8 837 aa12.23□□□□□ -0.45
PKP4-206ENST00000452162 TRIM75PA6NK02 468 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 PPATQ06203 517 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 PPIL2Q13356 520 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
PKP4-206ENST00000452162 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 NAP1L5Q96NT1 182 aaPredicted RBP12.22□□□□□ -0.45
PKP4-206ENST00000452162 BIN1O00499 593 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 GH2P01242 217 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 PTGS1P23219 599 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 ZRSR1Q15695 479 aaKnown RBP12.22□□□□□ -0.45
PKP4-206ENST00000452162 SPECC1Q5M775 1068 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 BRMS1Q9HCU9 246 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms