RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZKSCAN3Q9BRR0 538 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 DSCC1Q9BVC3 393 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 BACH2Q9BYV9 841 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 SENP6Q9GZR1 1112 aaPredicted RBP20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 IL25Q9H293 177 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 PCDH10Q9P2E7 1040 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 PRR12Q9ULL5 1215 aa20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 DIS3Q9Y2L1 958 aaKnown RBP20.02■□□□□ 0.8
PRPF40A-204ENST00000450303 NEDD4P46934 1319 aa20.02■□□□□ 0.79
PRPF40A-204ENST00000450303 TOP1P11387 765 aaKnown RBP20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 SYN1P17600 705 aa20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 ANKRD35Q8N283 1001 aa20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 GPCPD1Q9NPB8 672 aa20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 TCP11L1Q9NUJ3 509 aa20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 RBM27Q9P2N5 1060 aaKnown RBP20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 ZNF536O15090 1300 aa20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 FRMPD2Q68DX3 1309 aaPredicted RBP20.01■□□□□ 0.79
PRPF40A-204ENST00000450303 LAMA4Q16363 1823 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 FDX1P10109 184 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 SLC16A2P36021 539 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 OAZ1P54368 228 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 LRRC26Q2I0M4 334 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 CHST13Q8NET6 341 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 DCAF4Q8WV16 495 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 RNF41Q9H4P4 317 aaPredicted RBP20■□□□□ 0.79
PRPF40A-204ENST00000450303 CTNNA3Q9UI47 895 aa20■□□□□ 0.79
PRPF40A-204ENST00000450303 DNAJC25-GNG10A0A024R161 153 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 PLA2G6O60733 806 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 ALAS1P13196 640 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 ATN1P54259 1190 aaPredicted RBP19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 ESR2Q92731 530 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 RNF146Q9NTX7 359 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 FBXO40Q9UH90 709 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 MCM3APO60318 1980 aa19.99■□□□□ 0.79
PRPF40A-204ENST00000450303 ZNF865P0CJ78 1059 aaPredicted RBP19.98■□□□□ 0.79
PRPF40A-204ENST00000450303 PCP11498 1178 aaKnown RBP19.98■□□□□ 0.79
PRPF40A-204ENST00000450303 ARRDC4Q8NCT1 418 aa19.98■□□□□ 0.79
PRPF40A-204ENST00000450303 TRERF1Q96PN7 1200 aa19.98■□□□□ 0.79
PRPF40A-204ENST00000450303 LSG1Q9H089 658 aaKnown RBP19.98■□□□□ 0.79
PRPF40A-204ENST00000450303 TRIOBPQ9H2D6 2365 aa19.98■□□□□ 0.79
PRPF40A-204ENST00000450303 B4E1Z4 1266 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 DNM1LO00429 736 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 KDM4AO75164 1064 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 SNAI1O95863 264 aaPredicted RBP19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 CNTN2Q02246 1040 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 IMMTQ16891 758 aaKnown RBP19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 MAP4K1Q92918 833 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 LENG1Q96BZ8 264 aaPredicted RBP19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 FGD4Q96M96 766 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 TTC14Q96N46 770 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 ACAD9Q9H845 621 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 CNPY2Q9Y2B0 182 aa19.97■□□□□ 0.79
PRPF40A-204ENST00000450303 KBTBD13C9JR72 458 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 PDHBP11177 359 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 FXR1P51114 621 aaKnown RBP eCLIP19.96■□□□□ 0.795e-6■■■□□ 17
PRPF40A-204ENST00000450303 PTH1RQ03431 593 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 LRRC41Q15345 812 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 MUM1L1Q5H9M0 696 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 SYDE2Q5VT97 1194 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 FERMT2Q96AC1 680 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 NRBP1Q9UHY1 535 aa19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 ZHX1Q9UKY1 873 aaPredicted RBP19.96■□□□□ 0.79
PRPF40A-204ENST00000450303 POTEB2H3BUK9 544 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 PGK1P00558 417 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 RARBP10826 455 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 USP26Q9BXU7 913 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 PRO3102Q9H379 93 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 A1CFQ9NQ94 594 aaKnown RBP19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 XPNPEP3Q9NQH7 507 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 CCPG1Q9ULG6 757 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 SYNGAP1Q96PV0 1343 aa19.95■□□□□ 0.78
PRPF40A-204ENST00000450303 SEC24BO95487 1268 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 GOLGA8HP0CJ92 632 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 AKR1A1P14550 325 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 ADCYAP1R1P41586 468 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 MAMDC4Q6UXC1 1216 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 BTNL9Q6UXG8 535 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 MSL3Q8N5Y2 521 aaKnown RBP19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 RANBP17Q9H2T7 1088 aaKnown RBP19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 ZSWIM5Q9P217 1185 aa19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 RBM8AQ9Y5S9 174 aaKnown RBP19.94■□□□□ 0.78
PRPF40A-204ENST00000450303 SOWAHBA6NEL2 793 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 ZNF543Q08ER8 600 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 ACVR2BQ13705 512 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 ARMCX2Q7L311 632 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 ZNF467Q7Z7K2 595 aaPredicted RBP19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 IQCA1Q86XH1 822 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 DGKHQ86XP1 1220 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 FAM133AQ8N9E0 248 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 CPVLQ9H3G5 476 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 FAM184BQ9ULE4 1060 aa19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 DDX49Q9Y6V7 483 aaKnown RBP19.93■□□□□ 0.78
PRPF40A-204ENST00000450303 ICAM1P05362 532 aa19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 RTP1P59025 263 aa19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms