RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 MYADML2A6NDP7 307 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 DUSP11O75319 330 aaKnown RBP11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 RASA1P20936 1047 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 IKQ13123 557 aaPredicted RBP11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 TIFAQ96CG3 184 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 PPP1R12CQ9BZL4 782 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 ZNF576Q9H609 170 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 HOMER2Q9NSB8 354 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 NYAP2Q9P242 653 aa11.53□□□□□ -0.56
SPTLC3-204ENST00000450297 PRDM1O75626 825 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 ASGR1P07306 291 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 CCDC144BQ3MJ40 725 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 SBK1Q52WX2 424 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 MFSD5Q6N075 450 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 KLHDC9Q8NEP7 349 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 ECHDC1Q9NTX5 307 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 FBXO40Q9UH90 709 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 FEM1BQ9UK73 627 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 ELP1O95163 1332 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 MROH7Q68CQ1 1323 aa11.52□□□□□ -0.57
SPTLC3-204ENST00000450297 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 A0A0U1RQG5 324 aaPredicted RBP11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 GSG1L2A8MUP6 293 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 GRXCR1A8MXD5 290 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 RNF113AO15541 343 aaKnown RBP11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 ACRP10323 421 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 CSF2RAP15509 400 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 MAMDC4Q6UXC1 1216 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 ARMCX2Q7L311 632 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 ABHD16BQ9H3Z7 469 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 TBX21Q9UL17 535 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 ROBO3Q96MS0 1386 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
SPTLC3-204ENST00000450297 ARVCFO00192 962 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 TTLL1O95922 423 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 TSPY3P0CV98 308 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 TSPY8P0CW00 308 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 BMP3P12645 472 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 GNAT2P19087 354 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 IGFBP4P22692 258 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 PBX2P40425 430 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 BEX3Q00994 111 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 TNFAIP2Q03169 654 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 ZNF365Q70YC5 407 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 APPBP2Q92624 585 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 NACAP1Q9BZK3 213 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 AP5M1Q9H0R1 490 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 MTIF3Q9H2K0 278 aaKnown RBP11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
SPTLC3-204ENST00000450297 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 RLFQ13129 1914 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 ATP2A1O14983 1001 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 GPAA1O43292 621 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 CST5P28325 142 aaPredicted RBP11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 CYP2C18P33260 490 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 GJA9P57773 515 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 CNTN2Q02246 1040 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 TMEM240Q5SV17 173 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 TSHZ3Q63HK5 1081 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 PSRC1Q6PGN9 363 aaPredicted RBP11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 CXCL17Q6UXB2 119 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 USP38Q8NB14 1042 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 OSBP2Q969R2 916 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 MTMR7Q9Y216 660 aa11.49□□□□□ -0.57
SPTLC3-204ENST00000450297 ADCY6O43306 1168 aa11.48□□□□□ -0.57
SPTLC3-204ENST00000450297 ZEB2O60315 1214 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms