RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 GHRP10912 638 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 TNFRSF8P28908 595 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 CDC25AP30304 524 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 ABL2P42684 1182 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 ITIH3Q06033 890 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 RIPK1Q13546 671 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 PPP1R7Q15435 360 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 NFXL1Q6ZNB6 911 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 SEC16BQ96JE7 1060 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 PAPOLBQ9NRJ5 636 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 CHCHD3Q9NX63 227 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 NOP53Q9NZM5 478 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 MAP3K19Q56UN5 1328 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 LRRC37A3O60309 1634 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 E7EWF7 191 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 CPLX1O14810 134 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 GALR2O43603 387 aaPredicted RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 TRAPPC3O43617 180 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 CHGBP05060 677 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 LINGO3P0C6S8 592 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 FERP16591 822 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 CCT6AP40227 531 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 VAV2P52735 878 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 HERVK_113P62684 666 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 ROR2Q01974 943 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 BLMHQ13867 455 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 QPCTQ16769 361 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 KLHL10Q6JEL2 608 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 ARMC9Q7Z3E5 817 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 VPS37DQ86XT2 251 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 CD302Q8IX05 232 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 ARFGAP2Q8N6H7 521 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 C1orf131Q8NDD1 294 aaKnown RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 CCT6BQ92526 530 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 EZH1Q92800 747 aaPredicted RBP9.58□□□□□ -0.88
LSM5-208ENST00000450169 TFR2Q9UP52 801 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 L3MBTL1Q9Y468 752 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
LSM5-208ENST00000450169 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 HPDP32754 393 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 STX17P56962 302 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 MRPS25P82663 173 aaKnown RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 FKBP15Q5T1M5 1219 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 ZNF572Q7Z3I7 529 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 CREG2Q8IUH2 290 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 GRAMD1CQ8IYS0 662 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 SPATA4Q8NEY3 305 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 GLMNQ92990 594 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 ALS2CR12Q96Q35 445 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 TSC22D3Q99576 134 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 C9orf78Q9NZ63 289 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 MED1Q15648 1581 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 PLEKHG1Q9ULL1 1385 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 SPDYE3A6NKU9 549 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 GOLGA8BA8MQT2 603 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 H7C1W4 665 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 N4BP3O15049 544 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 POLR2DO15514 142 aaKnown RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 LUC7L3O95232 432 aaKnown RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 MATR3P43243 847 aaKnown RBP eCLIP9.57□□□□□ -0.88
LSM5-208ENST00000450169 KRT83P78385 493 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 GKAP1Q5VSY0 366 aaPredicted RBP9.57□□□□□ -0.88
LSM5-208ENST00000450169 HAUS3Q68CZ6 603 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 B4GALNT2Q8NHY0 566 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 SLC5A4Q9NY91 659 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 RGL1Q9NZL6 768 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 LMCD1Q9NZU5 365 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
LSM5-208ENST00000450169 SLIT1O75093 1534 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 ARHGAP23Q9P227 1491 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 PTPRUQ92729 1446 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 C5orf60A6NFR6 353 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 A6NHS1 94 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
LSM5-208ENST00000450169 PPIP5K2O43314 1243 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 DIAPH2O60879 1101 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 PPFIA2O75334 1257 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 KIF4AO95239 1232 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 CLTAP09496 248 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
LSM5-208ENST00000450169 RFX1P22670 979 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 GCLCP48506 637 aaPredicted RBP9.56□□□□□ -0.88
LSM5-208ENST00000450169 PPARAQ07869 468 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 BYSLQ13895 437 aaKnown RBP9.56□□□□□ -0.88
LSM5-208ENST00000450169 PDIA5Q14554 519 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 GNPTABQ3T906 1256 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 SPATA21Q7Z572 469 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 PNMA8AQ86V59 439 aaPredicted RBP9.56□□□□□ -0.88
LSM5-208ENST00000450169 FBXL16Q8N461 479 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
LSM5-208ENST00000450169 SNX12Q9UMY4 172 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms