RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 KIAA0355O15063 1070 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 SLC25A27O95847 323 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 KCTD2Q14681 263 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 LRRC47Q8N1G4 583 aaKnown RBP20.73■□□□□ 0.91
FAM3A-216ENST00000449971 TIFAQ96CG3 184 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 TINF2Q9BSI4 451 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 ZNF576Q9H609 170 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 STARD7Q9NQZ5 370 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 PPP1R9AQ9ULJ8 1098 aa20.73■□□□□ 0.91
FAM3A-216ENST00000449971 ZNFX1Q9P2E3 1918 aaKnown RBP20.72■□□□□ 0.91
FAM3A-216ENST00000449971 TMEM265A0A087WTH1 108 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.72■□□□□ 0.91
FAM3A-216ENST00000449971 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.72■□□□□ 0.91
FAM3A-216ENST00000449971 COL9A1P20849 921 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 SLC4A3P48751 1232 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 HAND2P61296 217 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 RRP12Q5JTH9 1297 aaKnown RBP20.72■□□□□ 0.91
FAM3A-216ENST00000449971 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 ADAMTS5Q9UNA0 930 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 A0A0G2JMZ2 1700 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 PLIN4Q96Q06 1357 aa20.72■□□□□ 0.91
FAM3A-216ENST00000449971 DCDC2CA8MYV0 355 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 VWA5AO00534 786 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 ORC4O43929 436 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 AKR1A1P14550 325 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 FAAP100Q0VG06 881 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 PPP4R3BQ5MIZ7 849 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 SLFN13Q68D06 897 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 VTI1AQ96AJ9 217 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 RAPGEFL1Q9UHV5 662 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
FAM3A-216ENST00000449971 STX8Q9UNK0 236 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 CNPY2Q9Y2B0 182 aa20.71■□□□□ 0.91
FAM3A-216ENST00000449971 GRXCR1A8MXD5 290 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 TNFRSF10AO00220 468 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 NMT2O60551 498 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 FGRP09769 529 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 GSPT1P15170 499 aaKnown RBP20.7■□□□□ 0.9
FAM3A-216ENST00000449971 ACLYP53396 1101 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 ZNF792Q3KQV3 632 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 PRPF38AQ8NAV1 312 aaKnown RBP20.7■□□□□ 0.9
FAM3A-216ENST00000449971 GMCL1P1Q8NEA9 526 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 CHMP4CQ96CF2 233 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 IL17RBQ9NRM6 502 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 NRBP1Q9UHY1 535 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 ZHX1Q9UKY1 873 aaPredicted RBP20.7■□□□□ 0.9
FAM3A-216ENST00000449971 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
FAM3A-216ENST00000449971 ZNF865P0CJ78 1059 aaPredicted RBP20.69■□□□□ 0.9
FAM3A-216ENST00000449971 PBX2P40425 430 aa20.69■□□□□ 0.9
FAM3A-216ENST00000449971 STAT3P40763 770 aa20.69■□□□□ 0.9
FAM3A-216ENST00000449971 RIOX2Q8IUF8 465 aa20.69■□□□□ 0.9
FAM3A-216ENST00000449971 NUP133Q8WUM0 1156 aa20.69■□□□□ 0.9
FAM3A-216ENST00000449971 KIFC2Q96AC6 838 aa20.69■□□□□ 0.9
FAM3A-216ENST00000449971 GAS2L1Q99501 681 aaPredicted RBP20.69■□□□□ 0.9
FAM3A-216ENST00000449971 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.69■□□□□ 0.94e-6■■□□□ 12.7
FAM3A-216ENST00000449971 FEM1BQ9UK73 627 aa20.69■□□□□ 0.9
FAM3A-216ENST00000449971 CTDP1Q9Y5B0 961 aaPredicted RBP20.69■□□□□ 0.9
FAM3A-216ENST00000449971 ZNF213O14771 459 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 ZBED4O75132 1171 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 BMP3P12645 472 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 IRX5P78411 483 aaPredicted RBP20.68■□□□□ 0.9
FAM3A-216ENST00000449971 CCDC85BQ15834 202 aaPredicted RBP20.68■□□□□ 0.9
FAM3A-216ENST00000449971 KCNA10Q16322 511 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 AKNAD1Q5T1N1 836 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 PRDM12Q9H4Q4 367 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 SYNRGQ9UMZ2 1314 aa20.68■□□□□ 0.9
FAM3A-216ENST00000449971 GREB1LQ9C091 1923 aaPredicted RBP20.68■□□□□ 0.9
FAM3A-216ENST00000449971 COL11A1P12107 1806 aaPredicted RBP20.67■□□□□ 0.9
FAM3A-216ENST00000449971 MYADML2A6NDP7 307 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 ADAMTS4O75173 837 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 TIMP1P01033 207 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 ACRP10323 421 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 MCCP23508 829 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 REPS2Q8NFH8 660 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 PPP1R12CQ9BZL4 782 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 MTMR7Q9Y216 660 aa20.67■□□□□ 0.9
FAM3A-216ENST00000449971 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 IGFBP4P22692 258 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 SLC1A4P43007 532 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 IKQ13123 557 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-216ENST00000449971 ANKRD33Q7Z3H0 272 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 TBC1D10CQ8IV04 446 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 CPXCR1Q8N123 301 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 DDX11Q96FC9 970 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 TSEN34Q9BSV6 310 aaKnown RBP20.66■□□□□ 0.9
FAM3A-216ENST00000449971 RNF41Q9H4P4 317 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-216ENST00000449971 ZNF214Q9UL59 606 aaPredicted RBP20.66■□□□□ 0.9
FAM3A-216ENST00000449971 FAM184BQ9ULE4 1060 aa20.66■□□□□ 0.9
FAM3A-216ENST00000449971 DIS3Q9Y2L1 958 aaKnown RBP20.66■□□□□ 0.9
FAM3A-216ENST00000449971 PLXNA1Q9UIW2 1896 aa20.65■□□□□ 0.9
FAM3A-216ENST00000449971 C6orf222P0C671 652 aaPredicted RBP20.65■□□□□ 0.9
FAM3A-216ENST00000449971 PCP11498 1178 aaKnown RBP20.65■□□□□ 0.9
FAM3A-216ENST00000449971 COPB2P35606 906 aa20.65■□□□□ 0.9
FAM3A-216ENST00000449971 PPIGQ13427 754 aaKnown RBP eCLIP20.65■□□□□ 0.92e-6■■■■□ 20.9
FAM3A-216ENST00000449971 SNRNP48Q6IEG0 339 aaKnown RBP20.65■□□□□ 0.9
FAM3A-216ENST00000449971 GMCL1Q96IK5 515 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms