RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 LRRC41Q15345 812 aa20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 ESR2Q92731 530 aa20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 AGBL1Q96MI9 1066 aa20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 GDF15Q99988 308 aa20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 PRR12Q9ULL5 1215 aa20.45■□□□□ 0.86
CLTCL1-203ENST00000449918 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 RNF180Q86T96 592 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 TBC1D10CQ8IV04 446 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 DSCC1Q9BVC3 393 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 RNF146Q9NTX7 359 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 CTNNA3Q9UI47 895 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 FAM184BQ9ULE4 1060 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 ZNFX1Q9P2E3 1918 aaKnown RBP20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 ZNF536O15090 1300 aa20.44■□□□□ 0.86
CLTCL1-203ENST00000449918 SNAI1O95863 264 aaPredicted RBP20.43■□□□□ 0.86
CLTCL1-203ENST00000449918 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
CLTCL1-203ENST00000449918 ALPK3Q96L96 1907 aa20.43■□□□□ 0.86
CLTCL1-203ENST00000449918 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 POTEB2H3BUK9 544 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 ALAS1P13196 640 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 ADCYAP1R1P41586 468 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 MAGEA10P43363 369 aaPredicted RBP20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 IMMTQ16891 758 aaKnown RBP20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 CCDC178Q5BJE1 867 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 BTNL9Q6UXG8 535 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 SLC39A5Q6ZMH5 540 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 ABHD16BQ9H3Z7 469 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 PRKAG2Q9UGJ0 569 aa20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 ZHX1Q9UKY1 873 aaPredicted RBP20.42■□□□□ 0.86
CLTCL1-203ENST00000449918 PGK1P00558 417 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 PDE4AP27815 886 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 SLC16A2P36021 539 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 RTP1P59025 263 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 SNAP25P60880 206 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 ACVR2BQ13705 512 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 SYDE2Q5VT97 1194 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 RASGRP2Q7LDG7 609 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 IQCA1Q86XH1 822 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 DGKHQ86XP1 1220 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 A1CFQ9NQ94 594 aaKnown RBP20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 PNMA2Q9UL42 364 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 CCPG1Q9ULG6 757 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 FRMPD3Q5JV73 1810 aa20.41■□□□□ 0.86
CLTCL1-203ENST00000449918 ICAM1P05362 532 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 PDHBP11177 359 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 NEDD4P46934 1319 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 FRMPD2Q68DX3 1309 aaPredicted RBP20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 TTBK2Q6IQ55 1244 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 FAM133AQ8N9E0 248 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 FERMT2Q96AC1 680 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 LBHD1Q9BQE6 289 aaPredicted RBP20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 UBE2OQ9C0C9 1292 aaKnown RBP20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 GPCPD1Q9NPB8 672 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 PHF24Q9UPV7 400 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 ATP11BQ9Y2G3 1177 aa20.4■□□□□ 0.86
CLTCL1-203ENST00000449918 ASB14A6NK59 587 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 CNTN2Q02246 1040 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 ARMCX2Q7L311 632 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 CCDC144CPQ8IYA2 1237 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 RUFY2Q8WXA3 655 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 FGD4Q96M96 766 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 TSEN34Q9BSV6 310 aaKnown RBP20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.85
CLTCL1-203ENST00000449918 KDM4AO75164 1064 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 ZNF543Q08ER8 600 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 SNX17Q15036 470 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 C1orf53Q5VUE5 145 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 ZKSCAN3Q9BRR0 538 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 KRT23Q9C075 422 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 CNNM2Q9H8M5 875 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 SPC25Q9HBM1 224 aa20.38■□□□□ 0.85
CLTCL1-203ENST00000449918 RANBP2P49792 3224 aaKnown RBP20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 ADAMTS4O75173 837 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 SNHG28P0DPA3 235 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 GSPT1P15170 499 aaKnown RBP20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 MDM2Q00987 491 aaPredicted RBP20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 CCDC144BQ3MJ40 725 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 MUM1L1Q5H9M0 696 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 GPATCH4Q5T3I0 446 aaKnown RBP20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 TDHQ8IZJ6 230 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 LENG1Q96BZ8 264 aaPredicted RBP20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 CYP39A1Q9NYL5 469 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 ZSWIM5Q9P217 1185 aa20.37■□□□□ 0.85
CLTCL1-203ENST00000449918 RAD50Q92878 1312 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 SYNRGQ9UMZ2 1314 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 SOWAHBA6NEL2 793 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 B4E1Z4 1266 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 TRIM60Q495X7 471 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 NSMFQ6X4W1 530 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 NUP133Q8WUM0 1156 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 ANKS1AQ92625 1134 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 ZSCAN10Q96SZ4 725 aaPredicted RBP20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
CLTCL1-203ENST00000449918 A0A1W2PQ45 241 aaPredicted RBP20.35■□□□□ 0.85
CLTCL1-203ENST00000449918 A0A1W2PQY0 241 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms