RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 LIG1P18858 919 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 ATP2B1P20020 1258 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
KDM1B-202ENST00000449850 ME1P48163 572 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 SPP2Q13103 211 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 CDCA5Q96FF9 252 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 PICK1Q9NRD5 415 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 WDR90Q96KV7 1748 aa13.77□□□□□ -0.21
KDM1B-202ENST00000449850 SCN4AP35499 1836 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 GNA11P29992 359 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
KDM1B-202ENST00000449850 PNMA8AQ86V59 439 aaPredicted RBP13.76□□□□□ -0.21
KDM1B-202ENST00000449850 LPAR1Q92633 364 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 SYAP1Q96A49 352 aaPredicted RBP13.76□□□□□ -0.21
KDM1B-202ENST00000449850 C6orf50Q9HD87 102 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
KDM1B-202ENST00000449850 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 ZHX2Q9Y6X8 837 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 GOLGA6L4A6NEF3 574 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 TRIM75PA6NK02 468 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 PLA2G6O60733 806 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 TAL1P17542 331 aaPredicted RBP13.76□□□□□ -0.21
KDM1B-202ENST00000449850 BACE1P56817 501 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 VGLL4Q14135 290 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 ADALQ6DHV7 355 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 SNCAIPQ9Y6H5 919 aa13.76□□□□□ -0.21
KDM1B-202ENST00000449850 PPP6R2O75170 966 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 VCAM1P19320 739 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 MOB2Q70IA6 237 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 GOLPH3LQ9H4A5 285 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 RIC8AQ9NPQ8 531 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
KDM1B-202ENST00000449850 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
KDM1B-202ENST00000449850 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
KDM1B-202ENST00000449850 ADCY7P51828 1080 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
KDM1B-202ENST00000449850 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 NR1I2O75469 434 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
KDM1B-202ENST00000449850 ZNF174Q15697 407 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 INF2Q27J81 1249 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 USH1GQ495M9 461 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 TTC38Q5R3I4 469 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 FAM160B2Q86V87 743 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 REXO1Q8N1G1 1221 aaKnown RBP13.74□□□□□ -0.21
KDM1B-202ENST00000449850 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
KDM1B-202ENST00000449850 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 DACT1Q9NYF0 836 aa13.74□□□□□ -0.21
KDM1B-202ENST00000449850 A0A1W2PQ27 194 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 A0A1W2PQ64 194 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 A0A1W2PQD8 194 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 OPLAHO14841 1288 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 USP14P54578 494 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 HMGCS2P54868 508 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 GRIN1Q05586 938 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 FMR1Q06787 632 aaKnown RBP eCLIP13.73□□□□□ -0.217e-6■■□□□ 12.8
KDM1B-202ENST00000449850 UBE2SQ16763 222 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 MAP1SQ66K74 1059 aaPredicted RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 CCAR1Q8IX12 1150 aaKnown RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 PAPPA2Q9BXP8 1791 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 EDIL3O43854 480 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 PTPREP23469 700 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 SAMD1Q6SPF0 538 aaPredicted RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 CUL5Q93034 780 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 C12orf42Q96LP6 360 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 RPAP3Q9H6T3 665 aaPredicted RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
KDM1B-202ENST00000449850 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
KDM1B-202ENST00000449850 PHIPQ8WWQ0 1821 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
KDM1B-202ENST00000449850 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms