RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TMEM132BQ14DG7 1078 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 FBXL16Q8N461 479 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 GBP4Q96PP9 640 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
CCDC171-203ENST00000449575 VAT1LQ9HCJ6 419 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 FEM1BQ9UK73 627 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 PLXNB2O15031 1838 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 KLRF2D3W0D1 207 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 CCT2P78371 535 aaKnown RBP11.44□□□□□ -0.58
CCDC171-203ENST00000449575 STK3Q13188 491 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 LBX2Q6XYB7 198 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
CCDC171-203ENST00000449575 FANCBQ8NB91 859 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 PIBF1Q8WXW3 757 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 PPP1R9BQ96SB3 815 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 SAGE1Q9NXZ1 904 aa11.44□□□□□ -0.58
CCDC171-203ENST00000449575 hCG_1642624A0A1W2PR95 340 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 GOLGA8BA8MQT2 603 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 GPR25O00155 361 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ZBTB43O43298 467 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 HSPA8P11142 646 aaKnown RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 PDIA3P30101 505 aaKnown RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 LBX1P52954 281 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 BTNL9Q6UXG8 535 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ADGRF4Q8IZF3 695 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 SRBD1Q8N5C6 995 aaKnown RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ZNF296Q8WUU4 475 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 PORCNQ9H237 461 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ZNF214Q9UL59 606 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ZNF536O15090 1300 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 DDAH1O94760 285 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 EVCP57679 992 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 SYDE2Q5VT97 1194 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 CCDC174Q6PII3 467 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 HSCBQ8IWL3 235 aa11.43□□□□□ -0.58
CCDC171-203ENST00000449575 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
CCDC171-203ENST00000449575 NCLP19338 710 aaKnown RBP11.42□□□□□ -0.58
CCDC171-203ENST00000449575 ERVK-9P63128 1117 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 ERVK-24P63145 666 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 PLS1Q14651 629 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 HS1BP3Q53T59 392 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 GPATCH4Q5T3I0 446 aaKnown RBP11.42□□□□□ -0.58
CCDC171-203ENST00000449575 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 JMJD4Q9H9V9 463 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 GOLGA8AA7E2F4 631 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 ME3Q16798 604 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 NECAB1Q8N987 351 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 CTCFLQ8NI51 663 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-203ENST00000449575 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 LCTP09848 1927 aa11.42□□□□□ -0.58
CCDC171-203ENST00000449575 PLA2G6O60733 806 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 PPP1R11O60927 126 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 GCLCP48506 637 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 ST3GAL1Q11201 340 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 FAM110CQ1W6H9 321 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 HOMER1Q86YM7 354 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 CD99L2Q8TCZ2 262 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 MOV10L1Q9BXT6 1211 aaKnown RBP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 ALDH8A1Q9H2A2 487 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 MORF4L1Q9UBU8 362 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 RABGAP1Q9Y3P9 1069 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 MYPNQ86TC9 1320 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 PLXNA1Q9UIW2 1896 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 MCM3APO60318 1980 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 SP3Q02447 781 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 FUT2Q10981 343 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 RTN1Q16799 776 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 PIGSQ96S52 555 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
CCDC171-203ENST00000449575 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
CCDC171-203ENST00000449575 LACTBP83111 547 aaPredicted RBP11.4□□□□□ -0.58
CCDC171-203ENST00000449575 SCRN1Q12765 414 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 RABEP1Q15276 862 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 SYNE3Q6ZMZ3 975 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 TMTC3Q6ZXV5 915 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 GPRC5AQ8NFJ5 357 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 MAP3K14Q99558 947 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 NTRK3Q16288 839 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 CDC37Q16543 378 aaPredicted RBP11.4□□□□□ -0.58
CCDC171-203ENST00000449575 QRICH1Q2TAL8 776 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 SNRNP48Q6IEG0 339 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms