RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SLC16A2P36021 539 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 CCDC96Q2M329 555 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 SIAH1Q8IUQ4 282 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 XPO4Q9C0E2 1151 aaKnown RBP18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
AP000253.1-201ENST00000449339 NFKBIEO00221 500 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 SLFN14P0C7P3 912 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 TERF1P54274 439 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 LRRC8AQ8IWT6 810 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 SPATA20Q8TB22 786 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 VPS33BQ9H267 617 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 TMOD2Q9NZR1 351 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 CCDC194A0A1B0GVG4 234 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 INF2Q27J81 1249 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 CDAN1Q8IWY9 1227 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 FAM177A1Q8N128 213 aaPredicted RBP18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 TRIML1Q8N9V2 468 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 COA7Q96BR5 231 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 BCS1LQ9Y276 419 aa18.29■□□□□ 0.52
AP000253.1-201ENST00000449339 ATP1A3P13637 1013 aa18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 MORC3Q14149 939 aa18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 ABCB5Q2M3G0 1257 aa18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 ARL6IP4Q66PJ3 421 aaKnown RBP18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 ADGRF4Q8IZF3 695 aa18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 JMJD4Q9H9V9 463 aa18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
AP000253.1-201ENST00000449339 NEMFO60524 1076 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 FANCCQ00597 558 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 ICA1Q05084 483 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 ARID5BQ14865 1188 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 IL17AQ16552 155 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 MLKLQ8NB16 471 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 SGIP1Q9BQI5 828 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 GH2P01242 217 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 SH3RF1Q7Z6J0 888 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 C4orf32Q8N8J7 132 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 AGBL3Q8NEM8 1001 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 CCDC12Q8WUD4 166 aaPredicted RBP18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 PAGE5Q96GU1 130 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 NYAP2Q9P242 653 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 DACH1Q9UI36 760 aa18.27■□□□□ 0.52
AP000253.1-201ENST00000449339 USP17L10C9JJH3 530 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 AFMP43652 599 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 CIAPIN1Q6FI81 312 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 IMPACTQ9P2X3 320 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 UTRNP46939 3433 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 PPP1R11O60927 126 aaPredicted RBP18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 RASSF7Q02833 373 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 NBPF9Q3BBW0 867 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 MKL1Q969V6 931 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 TMEM39BQ9GZU3 492 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 C6orf50Q9HD87 102 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 FANCLQ9NW38 375 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 TMEM260Q9NX78 707 aa18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
AP000253.1-201ENST00000449339 COL2A1P02458 1487 aaPredicted RBP18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 TPM2P07951 284 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 GSDMDP57764 484 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 SLFN13Q68D06 897 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 FAM151AQ8WW52 585 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 MYO1BO43795 1136 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 LONP1P36776 959 aaKnown RBP18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 E2F4Q16254 413 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 RBM26Q5T8P6 1007 aaKnown RBP18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
AP000253.1-201ENST00000449339 SERPINC1P01008 464 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 SLC1A4P43007 532 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 PTGER2P43116 358 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 PRELPP51888 382 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 FMR1Q06787 632 aaKnown RBP eCLIP18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 GPATCH4Q5T3I0 446 aaKnown RBP18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 PYM1Q9BRP8 204 aaKnown RBP18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 TMEM60Q9H2L4 133 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 ARFGEF1Q9Y6D6 1849 aa18.24■□□□□ 0.51
AP000253.1-201ENST00000449339 CASP1P29466 404 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 GNA11P29992 359 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 UBASH3AP57075 661 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 DPYDQ12882 1025 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 PNMA6FA0A0J9YX94 578 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 WNT10BO00744 389 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 EGFRP00533 1210 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 SKILP12757 684 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
AP000253.1-201ENST00000449339 MTMR14Q8NCE2 650 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms