RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 SLC1A4P43007 532 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 TFAP4Q01664 338 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 KCNA10Q16322 511 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.81□□□□□ -0.2
COPS7B-213ENST00000449174 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
COPS7B-213ENST00000449174 PI4K2BQ8TCG2 481 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 STAG1Q8WVM7 1258 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 LENG1Q96BZ8 264 aaPredicted RBP13.81□□□□□ -0.2
COPS7B-213ENST00000449174 RNPC3Q96LT9 517 aaKnown RBP13.81□□□□□ -0.2
COPS7B-213ENST00000449174 UPF3AQ9H1J1 476 aaKnown RBP13.81□□□□□ -0.2
COPS7B-213ENST00000449174 SEMA6BQ9H3T3 888 aa13.81□□□□□ -0.2
COPS7B-213ENST00000449174 ASB14A6NK59 587 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 TMEM232C9JQI7 657 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 TIMP1P01033 207 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 C6orf222P0C671 652 aaPredicted RBP13.8□□□□□ -0.2
COPS7B-213ENST00000449174 ITGB8P26012 769 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 GJA9P57773 515 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 NKX3-2P78367 333 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 ARMCX2Q7L311 632 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 TICAM2Q86XR7 235 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 FAM161BQ96MY7 647 aa13.8□□□□□ -0.2
COPS7B-213ENST00000449174 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
COPS7B-213ENST00000449174 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
COPS7B-213ENST00000449174 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-213ENST00000449174 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 ASGR1P07306 291 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 IKQ13123 557 aaPredicted RBP13.79□□□□□ -0.2
COPS7B-213ENST00000449174 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 CCDC144CPQ8IYA2 1237 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 FAM133AQ8N9E0 248 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 FGD4Q96M96 766 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 SEC62Q99442 399 aaKnown RBP13.79□□□□□ -0.2
COPS7B-213ENST00000449174 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
COPS7B-213ENST00000449174 STX8Q9UNK0 236 aa13.79□□□□□ -0.2
COPS7B-213ENST00000449174 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-213ENST00000449174 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
COPS7B-213ENST00000449174 TLR3O15455 904 aaKnown RBP13.78□□□□□ -0.2
COPS7B-213ENST00000449174 CABYRO75952 493 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 CDK7P50613 346 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■□□□□ 9.6
COPS7B-213ENST00000449174 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 MFSD5Q6N075 450 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 RNF146Q9NTX7 359 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
COPS7B-213ENST00000449174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
COPS7B-213ENST00000449174 MYADML2A6NDP7 307 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 ARVCFO00192 962 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 ZNF536O15090 1300 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 EPHB4P54760 987 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 TMEM199Q8N511 208 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 VTI1AQ96AJ9 217 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
COPS7B-213ENST00000449174 PCDHB15Q9Y5E8 787 aa13.77□□□□□ -0.21
COPS7B-213ENST00000449174 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 LOC102724159A0A0B4J2E5 919 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 ADCY6O43306 1168 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 ZEB2O60315 1214 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 MCCP23508 829 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 NOVP48745 357 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 TNFAIP2Q03169 654 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 PWP2Q15269 919 aaKnown RBP13.76□□□□□ -0.21
COPS7B-213ENST00000449174 FAM126BQ8IXS8 530 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 MAFAQ8NHW3 353 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-213ENST00000449174 DCAF4Q8WV16 495 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 TRERF1Q96PN7 1200 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-213ENST00000449174 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 Q9Y3F1 56 aa13.76□□□□□ -0.21
COPS7B-213ENST00000449174 LAMA2P24043 3122 aaKnown RBP13.76□□□□□ -0.21
COPS7B-213ENST00000449174 ORC4O43929 436 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 ICAM1P05362 532 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 FGRP09769 529 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 ALAS1P13196 640 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 FOSL2P15408 326 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 ALX1Q15699 326 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-213ENST00000449174 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
COPS7B-213ENST00000449174 OTUD7AQ8TE49 926 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-213ENST00000449174 COL25A1Q9BXS0 654 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-213ENST00000449174 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
COPS7B-213ENST00000449174 LRRC37A2A6NM11 1700 aa13.75□□□□□ -0.21
COPS7B-213ENST00000449174 ZMYM6O95789 1325 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 CTAGE5O15320 804 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms