RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 STRN3Q13033 797 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 SYDE2Q5VT97 1194 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 OTUD6AQ7L8S5 288 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 EXOC8Q8IYI6 725 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 FLCNQ8NFG4 579 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 TDRD7Q8NHU6 1098 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 ACSF2Q96CM8 615 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 SERTAD1Q9UHV2 236 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 RBM8AQ9Y5S9 174 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 SMTNP53814 917 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CTDSPL2Q05D32 466 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CDC42EP5Q6NZY7 148 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 METTL23Q86XA0 190 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CCDC83Q8IWF9 413 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 TRPM4Q8TD43 1214 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 FRMPD2Q68DX3 1309 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 AMHP03971 560 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 ME1P48163 572 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 FAM83BQ5T0W9 1011 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 ZBTB8OSQ8IWT0 167 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 UBN2Q6ZU65 1347 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 KINO60870 393 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 BMP15O95972 392 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CDK8P49336 464 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 PAN2Q504Q3 1202 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 DPP7Q9UHL4 492 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 ZNF541Q9H0D2 1346 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 SETD1AO15047 1707 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CCDC169A6NNP5 214 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 KLRF2D3W0D1 207 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 GAS7O60861 476 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 GADD45BO75293 160 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 ZBTB48P10074 688 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 CCND2P30279 289 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 PPIL2Q13356 520 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 FBXO46Q6PJ61 603 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 MED10Q9BTT4 135 aa6.34□□□□□ -1.39
CDC42BPA-209ENST00000448940 ANKRD62A6NC57 917 aa6.34□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA6L19H0YKK7 550 aa6.34□□□□□ -1.4
CDC42BPA-209ENST00000448940 NSUN6Q8TEA1 469 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-209ENST00000448940 LRRC45Q96CN5 670 aa6.34□□□□□ -1.4
CDC42BPA-209ENST00000448940 COL14A1Q05707 1796 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 PPIGQ13427 754 aaKnown RBP eCLIP6.33□□□□□ -1.42e-7■■■□□ 16.3
CDC42BPA-209ENST00000448940 POLA2Q14181 598 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 DEFB123Q8N688 67 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 ATOH1Q92858 354 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 PSTPIP2Q9H939 334 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 RAVER2Q9HCJ3 691 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 MOSPD1Q9UJG1 213 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 PDE4DIPQ5VU43 2346 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 MAP3K7O43318 606 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZNF853P0CG23 659 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 INPP5BP32019 993 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 KPNA1P52294 538 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 JAKMIP3Q5VZ66 844 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 RABGAP1Q9Y3P9 1069 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 GPR25O00155 361 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 NFKBIEO00221 500 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 CPT1AP50416 773 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 HS6ST3Q8IZP7 471 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 SNX19Q92543 992 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 TMEM169Q96HH4 297 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 MROH8Q9H579 483 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 C11orf49Q9H6J7 331 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 SH2B1Q9NRF2 756 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 USP32Q8NFA0 1604 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARHGEF35A5YM69 484 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 KCTD1Q719H9 257 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 MIER3Q7Z3K6 550 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 RGL4Q8IZJ4 473 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 WNK4Q96J92 1243 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 IPO11Q9UI26 975 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 NCAM2O15394 837 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 MYBP10242 640 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRELPP51888 382 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 BIRC3Q13489 604 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 TWF2Q6IBS0 349 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARMCX5Q6P1M9 558 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 TMC7Q7Z402 723 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 SLC44A5Q8NCS7 719 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 RIOK1Q9BRS2 568 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 POLR3EQ9NVU0 708 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 UTYO14607 1347 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 GOLGA6L3A6NEY3 463 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 FAM13AO94988 1023 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 CTSHP09668 335 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 SPDYE2Q495Y8 402 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 HAUS3Q68CZ6 603 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 REXO1Q8N1G1 1221 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 ATP6V0A1Q93050 837 aa6.33□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARHGEF37A1IGU5 675 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 SMC2O95347 1197 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 NEDD9Q14511 834 aa6.32□□□□□ -1.4
CDC42BPA-209ENST00000448940 FKBP1CQ5VVH2 108 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms