RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 C6orf222P0C671 652 aaPredicted RBP18.45■□□□□ 0.54
TRA2A-203ENST00000448549 MX1P20591 662 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 MCCP23508 829 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 STAT2P52630 851 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 SMAD3P84022 425 aaKnown RBP18.45■□□□□ 0.54
TRA2A-203ENST00000448549 CNTN2Q02246 1040 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 CCDC129Q6ZRS4 1044 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 ARMCX2Q7L311 632 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 TOX2Q96NM4 488 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 CDX2Q99626 313 aaPredicted RBP18.45■□□□□ 0.54
TRA2A-203ENST00000448549 ABHD16BQ9H3Z7 469 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 INCENPQ9NQS7 918 aa18.45■□□□□ 0.54
TRA2A-203ENST00000448549 FOXP2O15409 715 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 FDX1P10109 184 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 SLC1A4P43007 532 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 FPGSQ05932 587 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 CTDSPL2Q05D32 466 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-203ENST00000448549 CCDC144CPQ8IYA2 1237 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 CHURC1Q8WUH1 139 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 STAG1Q8WVM7 1258 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 GMCL1Q96IK5 515 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 RNPC3Q96LT9 517 aaKnown RBP18.44■□□□□ 0.54
TRA2A-203ENST00000448549 AGBL1Q96MI9 1066 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 GLT1D1Q96MS3 346 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 STX8Q9UNK0 236 aa18.44■□□□□ 0.54
TRA2A-203ENST00000448549 NMT2O60551 498 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 ASGR1P07306 291 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 CST5P28325 142 aaPredicted RBP18.43■□□□□ 0.54
TRA2A-203ENST00000448549 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 FAM160B2Q86V87 743 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRA2A-203ENST00000448549 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
TRA2A-203ENST00000448549 VTI1AQ96AJ9 217 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 TTYH1Q9H313 450 aaPredicted RBP18.43■□□□□ 0.54
TRA2A-203ENST00000448549 ACAD9Q9H845 621 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 SPC25Q9HBM1 224 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 IL17RBQ9NRM6 502 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 RNF146Q9NTX7 359 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRA2A-203ENST00000448549 ZNF536O15090 1300 aa18.43■□□□□ 0.54
TRA2A-203ENST00000448549 A0A0C4DFX4 3053 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 TSPY2A6NKD2 308 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 GJA9P57773 515 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 SNAP25P60880 206 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 GNASQ5JWF2 1037 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 FAM133AQ8N9E0 248 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 KATNBL1Q9H079 304 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 UPF3AQ9H1J1 476 aaKnown RBP18.42■□□□□ 0.54
TRA2A-203ENST00000448549 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
TRA2A-203ENST00000448549 ELP1O95163 1332 aa18.42■□□□□ 0.54
TRA2A-203ENST00000448549 ZNFX1Q9P2E3 1918 aaKnown RBP18.41■□□□□ 0.54
TRA2A-203ENST00000448549 SOWAHBA6NEL2 793 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 TIMP1P01033 207 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 ALAS1P13196 640 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 CDK7P50613 346 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 ANKRD45Q5TZF3 282 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 VPS53Q5VIR6 699 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 TRERF1Q96PN7 1200 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 TBX21Q9UL17 535 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
TRA2A-203ENST00000448549 SMCHD1A6NHR9 2005 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.4■□□□□ 0.54
TRA2A-203ENST00000448549 CTAGE5O15320 804 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 RANBP6O60518 1105 aaKnown RBP18.4■□□□□ 0.54
TRA2A-203ENST00000448549 PLA2G6O60733 806 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
TRA2A-203ENST00000448549 MYLIPQ8WY64 445 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 MTMR7Q9Y216 660 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 DDX49Q9Y6V7 483 aaKnown RBP18.4■□□□□ 0.54
TRA2A-203ENST00000448549 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
TRA2A-203ENST00000448549 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
TRA2A-203ENST00000448549 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
TRA2A-203ENST00000448549 ARVCFO00192 962 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 BEX3Q00994 111 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 TNFAIP2Q03169 654 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 TKFCQ3LXA3 575 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 COL25A1Q9BXS0 654 aaPredicted RBP18.39■□□□□ 0.53
TRA2A-203ENST00000448549 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.53
TRA2A-203ENST00000448549 ANAPC4Q9UJX5 808 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 PLXNA1Q9UIW2 1896 aa18.39■□□□□ 0.53
TRA2A-203ENST00000448549 ASB14A6NK59 587 aa18.38■□□□□ 0.53
TRA2A-203ENST00000448549 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
TRA2A-203ENST00000448549 MFSD5Q6N075 450 aa18.38■□□□□ 0.53
TRA2A-203ENST00000448549 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
TRA2A-203ENST00000448549 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.37■□□□□ 0.53
TRA2A-203ENST00000448549 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.37■□□□□ 0.53
TRA2A-203ENST00000448549 PTGS1P23219 599 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
TRA2A-203ENST00000448549 NKX3-2P78367 333 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 CXCL17Q6UXB2 119 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 C16orf59Q7L2K0 433 aa18.37■□□□□ 0.53
TRA2A-203ENST00000448549 FAM126BQ8IXS8 530 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms