RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 PRR12Q9ULL5 1215 aa23.21■■□□□ 1.31
VCP-203ENST00000448530 CCDC174Q6PII3 467 aa23.2■■□□□ 1.3
VCP-203ENST00000448530 TBC1D10CQ8IV04 446 aa23.2■■□□□ 1.3
VCP-203ENST00000448530 AGBL1Q96MI9 1066 aa23.2■■□□□ 1.3
VCP-203ENST00000448530 TMEM47Q9BQJ4 181 aa23.2■■□□□ 1.3
VCP-203ENST00000448530 RNF146Q9NTX7 359 aa23.2■■□□□ 1.3
VCP-203ENST00000448530 ALAS1P13196 640 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 TAL1P17542 331 aaPredicted RBP23.19■■□□□ 1.3
VCP-203ENST00000448530 LRRC41Q15345 812 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 MAMDC4Q6UXC1 1216 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 RNF180Q86T96 592 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 TTC14Q96N46 770 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 CTNNA3Q9UI47 895 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 ZHX1Q9UKY1 873 aaPredicted RBP23.19■■□□□ 1.3
VCP-203ENST00000448530 FAM184BQ9ULE4 1060 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 LAMA4Q16363 1823 aa23.19■■□□□ 1.3
VCP-203ENST00000448530 POTEB2H3BUK9 544 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 ZNF865P0CJ78 1059 aaPredicted RBP23.18■■□□□ 1.3
VCP-203ENST00000448530 NT5C2P49902 561 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 RASGRP2Q7LDG7 609 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 TRERF1Q96PN7 1200 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 GDF15Q99988 308 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 DSCC1Q9BVC3 393 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 PRKAG2Q9UGJ0 569 aa23.18■■□□□ 1.3
VCP-203ENST00000448530 ZNF536O15090 1300 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 BMP8BP34820 402 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 ADCYAP1R1P41586 468 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 MAGEA10P43363 369 aaPredicted RBP23.17■■□□□ 1.3
VCP-203ENST00000448530 SNAP25P60880 206 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 IMMTQ16891 758 aaKnown RBP23.17■■□□□ 1.3
VCP-203ENST00000448530 TTC22Q5TAA0 569 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 GPCPD1Q9NPB8 672 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.17■■□□□ 1.3
VCP-203ENST00000448530 PCDH10Q9P2E7 1040 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 CCPG1Q9ULG6 757 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 ATP11BQ9Y2G3 1177 aa23.17■■□□□ 1.3
VCP-203ENST00000448530 NEDD4P46934 1319 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 FRMPD2Q68DX3 1309 aaPredicted RBP23.16■■□□□ 1.3
VCP-203ENST00000448530 SNAI1O95863 264 aaPredicted RBP23.16■■□□□ 1.3
VCP-203ENST00000448530 PGK1P00558 417 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 PDE4AP27815 886 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 SLC16A2P36021 539 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 RTP1P59025 263 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 CCDC178Q5BJE1 867 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 SYDE2Q5VT97 1194 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 SLC39A5Q6ZMH5 540 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 IQCA1Q86XH1 822 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 FERMT2Q96AC1 680 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 ABHD16BQ9H3Z7 469 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 RANBP2P49792 3224 aaKnown RBP23.16■■□□□ 1.3
VCP-203ENST00000448530 MCM3APO60318 1980 aa23.16■■□□□ 1.3
VCP-203ENST00000448530 ACVR2BQ13705 512 aa23.15■■□□□ 1.3
VCP-203ENST00000448530 TTBK2Q6IQ55 1244 aa23.15■■□□□ 1.3
VCP-203ENST00000448530 BTNL9Q6UXG8 535 aa23.15■■□□□ 1.3
VCP-203ENST00000448530 LBHD1Q9BQE6 289 aaPredicted RBP23.15■■□□□ 1.3
VCP-203ENST00000448530 UBE2OQ9C0C9 1292 aaKnown RBP23.15■■□□□ 1.3
VCP-203ENST00000448530 A1CFQ9NQ94 594 aaKnown RBP23.15■■□□□ 1.3
VCP-203ENST00000448530 DNAH12Q6ZR08 3092 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 ICAM1P05362 532 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 PDHBP11177 359 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 ARMCX2Q7L311 632 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 RUFY2Q8WXA3 655 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 ZKSCAN3Q9BRR0 538 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 RANBP17Q9H2T7 1088 aaKnown RBP23.14■■□□□ 1.29
VCP-203ENST00000448530 PHF24Q9UPV7 400 aa23.14■■□□□ 1.29
VCP-203ENST00000448530 KDM4AO75164 1064 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 DGKHQ86XP1 1220 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 CCDC144CPQ8IYA2 1237 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 FAM133AQ8N9E0 248 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 LENG1Q96BZ8 264 aaPredicted RBP23.13■■□□□ 1.29
VCP-203ENST00000448530 FGD4Q96M96 766 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 SPC25Q9HBM1 224 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
VCP-203ENST00000448530 ASB14A6NK59 587 aa23.12■■□□□ 1.29
VCP-203ENST00000448530 DUSP11O75319 330 aaKnown RBP23.12■■□□□ 1.29
VCP-203ENST00000448530 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
VCP-203ENST00000448530 MDM2Q00987 491 aaPredicted RBP23.12■■□□□ 1.29
VCP-203ENST00000448530 ZNF543Q08ER8 600 aa23.12■■□□□ 1.29
VCP-203ENST00000448530 MUM1L1Q5H9M0 696 aa23.12■■□□□ 1.29
VCP-203ENST00000448530 NSMFQ6X4W1 530 aa23.12■■□□□ 1.29
VCP-203ENST00000448530 KRT23Q9C075 422 aa23.12■■□□□ 1.29
VCP-203ENST00000448530 CNNM2Q9H8M5 875 aa23.12■■□□□ 1.29
VCP-203ENST00000448530 RAD50Q92878 1312 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 SYNRGQ9UMZ2 1314 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 B4E1Z4 1266 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 CCDC144BQ3MJ40 725 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 TRIM60Q495X7 471 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 GPATCH4Q5T3I0 446 aaKnown RBP23.11■■□□□ 1.29
VCP-203ENST00000448530 TSEN34Q9BSV6 310 aaKnown RBP23.11■■□□□ 1.29
VCP-203ENST00000448530 KAT14Q9H8E8 782 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 CYP39A1Q9NYL5 469 aa23.11■■□□□ 1.29
VCP-203ENST00000448530 ADAMTS4O75173 837 aa23.1■■□□□ 1.29
VCP-203ENST00000448530 SNX17Q15036 470 aa23.1■■□□□ 1.29
VCP-203ENST00000448530 TDHQ8IZJ6 230 aa23.1■■□□□ 1.29
VCP-203ENST00000448530 ZSCAN10Q96SZ4 725 aaPredicted RBP23.1■■□□□ 1.29
VCP-203ENST00000448530 PRDM5Q9NQX1 630 aaPredicted RBP23.1■■□□□ 1.29
VCP-203ENST00000448530 A0A1W2PQ45 241 aaPredicted RBP23.09■■□□□ 1.29
VCP-203ENST00000448530 A0A1W2PQY0 241 aa23.09■■□□□ 1.29
VCP-203ENST00000448530 SOWAHBA6NEL2 793 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms