RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 RARBP10826 455 aa20.86■□□□□ 0.93
DDX56-207ENST00000448192 ATN1P54259 1190 aaPredicted RBP20.86■□□□□ 0.93
DDX56-207ENST00000448192 TTC22Q5TAA0 569 aa20.86■□□□□ 0.93
DDX56-207ENST00000448192 PRO3102Q9H379 93 aa20.86■□□□□ 0.93
DDX56-207ENST00000448192 ZNF536O15090 1300 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 NEDD4P46934 1319 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 ZNF865P0CJ78 1059 aaPredicted RBP20.85■□□□□ 0.93
DDX56-207ENST00000448192 ALAS1P13196 640 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDX56-207ENST00000448192 MSL3Q8N5Y2 521 aaKnown RBP20.85■□□□□ 0.93
DDX56-207ENST00000448192 ESR2Q92731 530 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 ACAD9Q9H845 621 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 GPCPD1Q9NPB8 672 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 XPNPEP3Q9NQH7 507 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 RNF146Q9NTX7 359 aa20.85■□□□□ 0.93
DDX56-207ENST00000448192 FRMPD2Q68DX3 1309 aaPredicted RBP20.84■□□□□ 0.93
DDX56-207ENST00000448192 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 GSPT1P15170 499 aaKnown RBP20.84■□□□□ 0.93
DDX56-207ENST00000448192 SLC16A2P36021 539 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 LRRC41Q15345 812 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 TTBK2Q6IQ55 1244 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 MAMDC4Q6UXC1 1216 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 TRERF1Q96PN7 1200 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 ZKSCAN3Q9BRR0 538 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 DSCC1Q9BVC3 393 aa20.84■□□□□ 0.93
DDX56-207ENST00000448192 SNAI1O95863 264 aaPredicted RBP20.83■□□□□ 0.93
DDX56-207ENST00000448192 AKR1A1P14550 325 aa20.83■□□□□ 0.93
DDX56-207ENST00000448192 IMMTQ16891 758 aaKnown RBP20.83■□□□□ 0.93
DDX56-207ENST00000448192 TKFCQ3LXA3 575 aa20.83■□□□□ 0.93
DDX56-207ENST00000448192 ZNF467Q7Z7K2 595 aaPredicted RBP20.83■□□□□ 0.93
DDX56-207ENST00000448192 TTC14Q96N46 770 aa20.83■□□□□ 0.93
DDX56-207ENST00000448192 ZHX1Q9UKY1 873 aaPredicted RBP20.83■□□□□ 0.93
DDX56-207ENST00000448192 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 PGK1P00558 417 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 ADCYAP1R1P41586 468 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 CNTN2Q02246 1040 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 SYDE2Q5VT97 1194 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 FERMT2Q96AC1 680 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 LENG1Q96BZ8 264 aaPredicted RBP20.82■□□□□ 0.92
DDX56-207ENST00000448192 GDF15Q99988 308 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.82■□□□□ 0.92
DDX56-207ENST00000448192 PCDH10Q9P2E7 1040 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 CTNNA3Q9UI47 895 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 CCPG1Q9ULG6 757 aa20.82■□□□□ 0.92
DDX56-207ENST00000448192 B4E1Z4 1266 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 KDM4AO75164 1064 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 PDHBP11177 359 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 MAGEA10P43363 369 aaPredicted RBP20.81■□□□□ 0.92
DDX56-207ENST00000448192 RTP1P59025 263 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 BTNL9Q6UXG8 535 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 RNF180Q86T96 592 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 IQCA1Q86XH1 822 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 FGD4Q96M96 766 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 IL25Q9H293 177 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 A1CFQ9NQ94 594 aaKnown RBP20.81■□□□□ 0.92
DDX56-207ENST00000448192 FAM184BQ9ULE4 1060 aa20.81■□□□□ 0.92
DDX56-207ENST00000448192 ICAM1P05362 532 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 ACVR2BQ13705 512 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 SLC39A5Q6ZMH5 540 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 FAM133AQ8N9E0 248 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
DDX56-207ENST00000448192 ATP11BQ9Y2G3 1177 aa20.8■□□□□ 0.92
DDX56-207ENST00000448192 A0A1W2PPC1 479 aa20.79■□□□□ 0.92
DDX56-207ENST00000448192 ZNF543Q08ER8 600 aa20.79■□□□□ 0.92
DDX56-207ENST00000448192 CCDC144CPQ8IYA2 1237 aa20.79■□□□□ 0.92
DDX56-207ENST00000448192 ABHD16BQ9H3Z7 469 aa20.79■□□□□ 0.92
DDX56-207ENST00000448192 BMP8BP34820 402 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 NT5C2P49902 561 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 CCDC178Q5BJE1 867 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 NSMFQ6X4W1 530 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 DGKHQ86XP1 1220 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 RUFY2Q8WXA3 655 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 ZSWIM5Q9P217 1185 aa20.78■□□□□ 0.92
DDX56-207ENST00000448192 LCTP09848 1927 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 SOWAHBA6NEL2 793 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 GOLGA8HP0CJ92 632 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 SNHG28P0DPA3 235 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 CHMLP26374 656 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 MDM2Q00987 491 aaPredicted RBP20.77■□□□□ 0.92
DDX56-207ENST00000448192 CCDC144BQ3MJ40 725 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 PNMA1Q8ND90 353 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.92
DDX56-207ENST00000448192 KRT23Q9C075 422 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 UBE2OQ9C0C9 1292 aaKnown RBP20.77■□□□□ 0.92
DDX56-207ENST00000448192 KAT14Q9H8E8 782 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 CNNM2Q9H8M5 875 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 CYP39A1Q9NYL5 469 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 PRKAG2Q9UGJ0 569 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 PHF24Q9UPV7 400 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 SZT2Q5T011 3432 aa20.77■□□□□ 0.92
DDX56-207ENST00000448192 RAD50Q92878 1312 aa20.77■□□□□ 0.91
DDX56-207ENST00000448192 SYNRGQ9UMZ2 1314 aa20.77■□□□□ 0.91
DDX56-207ENST00000448192 ASB14A6NK59 587 aa20.76■□□□□ 0.91
DDX56-207ENST00000448192 ADAMTS4O75173 837 aa20.76■□□□□ 0.91
DDX56-207ENST00000448192 TRIM60Q495X7 471 aa20.76■□□□□ 0.91
DDX56-207ENST00000448192 DUSP11O75319 330 aaKnown RBP20.75■□□□□ 0.91
DDX56-207ENST00000448192 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
DDX56-207ENST00000448192 ENAHQ8N8S7 591 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms