RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 ZNF654Q8IZM8 581 aa15.6■□□□□ 0.09
SNHG4-201ENST00000448190 TRERF1Q96PN7 1200 aa15.6■□□□□ 0.09
SNHG4-201ENST00000448190 RANBP17Q9H2T7 1088 aaKnown RBP15.6■□□□□ 0.09
SNHG4-201ENST00000448190 FLRT1Q9NZU1 646 aa15.6■□□□□ 0.09
SNHG4-201ENST00000448190 CCPG1Q9ULG6 757 aa15.6■□□□□ 0.09
SNHG4-201ENST00000448190 NAP1L2Q9ULW6 460 aaPredicted RBP15.6■□□□□ 0.09
SNHG4-201ENST00000448190 MYH8P13535 1937 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
SNHG4-201ENST00000448190 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 INHAP05111 366 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 CASTP20810 708 aaKnown RBP15.59■□□□□ 0.09
SNHG4-201ENST00000448190 FGD1P98174 961 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 KCTD2Q14681 263 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 GRM4Q14833 912 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 SLC35G1Q2M3R5 365 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 MUM1L1Q5H9M0 696 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 Q6ZUG5 572 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 CMTR1Q8N1G2 835 aaKnown RBP15.59■□□□□ 0.09
SNHG4-201ENST00000448190 TMTC2Q8N394 836 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 SLAIN1Q8ND83 568 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 SOCS4Q8WXH5 440 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 TRIB2Q92519 343 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 ARMC5Q96C12 935 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 ZNF333Q96JL9 665 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 JMJD4Q9H9V9 463 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 BRPF3Q9ULD4 1205 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
SNHG4-201ENST00000448190 HMGB1P09429 215 aaKnown RBP15.58■□□□□ 0.08
SNHG4-201ENST00000448190 LIFRP42702 1097 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 OAZ1P54368 228 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 USH1GQ495M9 461 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 ANKRD35Q8N283 1001 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 CCDC82Q8N4S0 544 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 PXYLP1Q8TE99 480 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 LARP6Q9BRS8 491 aaKnown RBP15.58■□□□□ 0.08
SNHG4-201ENST00000448190 RNF146Q9NTX7 359 aa15.58■□□□□ 0.08
SNHG4-201ENST00000448190 ICAM1P05362 532 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 XRCC5P13010 732 aaKnown RBP15.57■□□□□ 0.08
SNHG4-201ENST00000448190 RPS6KB1P23443 525 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 PSMA5P28066 241 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 CYP2C19P33261 490 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 APOBRQ0VD83 1088 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 CDC37Q16543 378 aaPredicted RBP15.57■□□□□ 0.08
SNHG4-201ENST00000448190 C8orf34Q49A92 452 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 CHST13Q8NET6 341 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 PURBQ96QR8 312 aaKnown RBP15.57■□□□□ 0.08
SNHG4-201ENST00000448190 MTA3Q9BTC8 594 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 UPF3BQ9BZI7 483 aaKnown RBP15.57■□□□□ 0.08
SNHG4-201ENST00000448190 UNC93B1Q9H1C4 597 aa15.57■□□□□ 0.08
SNHG4-201ENST00000448190 KLF18A0A0U1RQI7 1052 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 POTEFA5A3E0 1075 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 EPB41L2O43491 1005 aaKnown RBP15.56■□□□□ 0.08
SNHG4-201ENST00000448190 CCL5P13501 91 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 COPB2P35606 906 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 UBXN2AP68543 259 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 CACNB2Q08289 660 aaPredicted RBP15.56■□□□□ 0.08
SNHG4-201ENST00000448190 QRICH1Q2TAL8 776 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 IFFO2Q5TF58 517 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 NSMFQ6X4W1 530 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 MICU3Q86XE3 530 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 ABRAQ8N0Z2 381 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 FANCBQ8NB91 859 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 BRF1Q92994 677 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 PIGSQ96S52 555 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 APBA2Q99767 749 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 TMEM106CQ9BVX2 250 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 RNF208Q9H0X6 261 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 ZSWIM6Q9HCJ5 1215 aa15.56■□□□□ 0.08
SNHG4-201ENST00000448190 NFIBO00712 420 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 CYTH3O43739 400 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 DDAH1O94760 285 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 HMGCRP04035 888 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 HOXC6P09630 235 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
SNHG4-201ENST00000448190 CNTN2Q02246 1040 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 ZNF792Q3KQV3 632 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 TKFCQ3LXA3 575 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 RUFY3Q7L099 469 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 SRBD1Q8N5C6 995 aaKnown RBP15.55■□□□□ 0.08
SNHG4-201ENST00000448190 CTCFLQ8NI51 663 aaPredicted RBP15.55■□□□□ 0.08
SNHG4-201ENST00000448190 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 ACAD9Q9H845 621 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 FBXO40Q9UH90 709 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 CYP46A1Q9Y6A2 500 aa15.55■□□□□ 0.08
SNHG4-201ENST00000448190 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
SNHG4-201ENST00000448190 WDR19Q8NEZ3 1342 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 hCG_1642624A0A1W2PR95 340 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 PPP1R11O60927 126 aaPredicted RBP15.54■□□□□ 0.08
SNHG4-201ENST00000448190 EN2P19622 333 aaPredicted RBP15.54■□□□□ 0.08
SNHG4-201ENST00000448190 KIF5BP33176 963 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 BAATQ14032 418 aaPredicted RBP15.54■□□□□ 0.08
SNHG4-201ENST00000448190 MFSD14CQ5VZR4 134 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 APOA5Q6Q788 366 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 SGMS1Q86VZ5 419 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms