RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 ASPRV1Q53RT3 343 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 BTNL9Q6UXG8 535 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 MICU3Q86XE3 530 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 RAB11FIP4Q86YS3 637 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 CCDC144CPQ8IYA2 1237 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 PRPF38AQ8NAV1 312 aaKnown RBP8.79□□□□□ -1
AC004540.1-206ENST00000448056 CTCFLQ8NI51 663 aaPredicted RBP8.79□□□□□ -1
AC004540.1-206ENST00000448056 P2RX7Q99572 595 aaKnown RBP8.79□□□□□ -1
AC004540.1-206ENST00000448056 TANGO6Q9C0B7 1094 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 ASCC2Q9H1I8 757 aaPredicted RBP8.79□□□□□ -1
AC004540.1-206ENST00000448056 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
AC004540.1-206ENST00000448056 FBXO28Q9NVF7 368 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 ISY1Q9ULR0 285 aaKnown RBP8.79□□□□□ -1
AC004540.1-206ENST00000448056 CCDC196A0A1B0GTZ2 297 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 GOLGA8AA7E2F4 631 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 GOLGA8BA8MQT2 603 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 PFKFB2O60825 505 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 CD2BP2O95400 341 aaKnown RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 ALDH1A1P00352 501 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 CYP2C8P10632 490 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 SMARCA1P28370 1054 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 CDC27P30260 824 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 ADD1P35611 737 aaKnown RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 MCM2P49736 904 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 GNAQP50148 359 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 METAP2P50579 478 aaKnown RBP eCLIP8.78□□□□□ -1
AC004540.1-206ENST00000448056 STAT2P52630 851 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 CCT2P78371 535 aaKnown RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 IRX3P78415 501 aaPredicted RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 STK3Q13188 491 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 ME3Q16798 604 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 RTN1Q16799 776 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 NOL8Q76FK4 1167 aaKnown RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 NBPF11Q86T75 865 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 FAM160B2Q86V87 743 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 KIFC2Q96AC6 838 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 ZSCAN31Q96LW9 406 aaPredicted RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 SLF1Q9BQI6 1058 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 LZTS2Q9BRK4 669 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 UBA5Q9GZZ9 404 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 SLKQ9H2G2 1235 aaPredicted RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 RBM28Q9NW13 759 aaKnown RBP8.78□□□□□ -1
AC004540.1-206ENST00000448056 RNF186Q9NXI6 227 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 PNMA3Q9UL41 463 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 ADAMTS5Q9UNA0 930 aa8.78□□□□□ -1
AC004540.1-206ENST00000448056 VWA5AO00534 786 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 CA12O43570 354 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 NUDT7P0C024 238 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 HERVK_113P62684 666 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 MAP2K1Q02750 393 aaPredicted RBP8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 IKQ13123 557 aaPredicted RBP8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 SLC35G1Q2M3R5 365 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 SYDE2Q5VT97 1194 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 LBX2Q6XYB7 198 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 TMTC3Q6ZXV5 915 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 ADGRF4Q8IZF3 695 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 CMTR1Q8N1G2 835 aaKnown RBP8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 SRBD1Q8N5C6 995 aaKnown RBP8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 NECAB1Q8N987 351 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 PARK7Q99497 189 aaKnown RBP8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 CPVLQ9H3G5 476 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 RIOX1Q9H6W3 641 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 ZFYVE28Q9HCC9 887 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 NCOA5Q9HCD5 579 aaKnown RBP8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 VAT1LQ9HCJ6 419 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 RBPJLQ9UBG7 517 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 PRR12Q9ULL5 1215 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 MYPNQ86TC9 1320 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 PCNTO95613 3336 aa8.77□□□□□ -1.01
AC004540.1-206ENST00000448056 NID2Q14112 1375 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 CYTH3O43739 400 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 DHX16O60231 1041 aaKnown RBP8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 TLR2O60603 784 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 ZBED4O75132 1171 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 TRPA1O75762 1119 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 PLEKHA8P1O95397 391 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 LARGE1O95461 756 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 FDX1P10109 184 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 GCLCP48506 637 aaPredicted RBP8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 SNAP25P60880 206 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 FUT2Q10981 343 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 SCRN1Q12765 414 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 CRHR2Q13324 411 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 TAF1CQ15572 869 aaPredicted RBP8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 NTRK3Q16288 839 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 CCDC82Q8N4S0 544 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 MB21D1Q8N884 522 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 SMCR8Q8TEV9 937 aaPredicted RBP8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 GTF3C2Q8WUA4 911 aaPredicted RBP8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 SNX21Q969T3 373 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 ATG4CQ96DT6 458 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 MTMR8Q96EF0 704 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 TMX3Q96JJ7 454 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 SPZ1Q9BXG8 430 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 CFHR5Q9BXR6 569 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 R3HDMLQ9H3Y0 253 aa8.76□□□□□ -1.01
AC004540.1-206ENST00000448056 JMJD4Q9H9V9 463 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms