RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 PRR12Q9ULL5 1215 aa28.21■■■□□ 2.11
MRPL28-205ENST00000447696 MTMR7Q9Y216 660 aa28.21■■■□□ 2.11
MRPL28-205ENST00000447696 ZNF536O15090 1300 aa28.2■■■□□ 2.11
MRPL28-205ENST00000447696 ZNFX1Q9P2E3 1918 aaKnown RBP28.2■■■□□ 2.11
MRPL28-205ENST00000447696 DNAJC25-GNG10A0A024R161 153 aa28.2■■■□□ 2.1
MRPL28-205ENST00000447696 CNGA1P29973 690 aa28.2■■■□□ 2.1
MRPL28-205ENST00000447696 MSL3Q8N5Y2 521 aaKnown RBP28.2■■■□□ 2.1
MRPL28-205ENST00000447696 CHMP4CQ96CF2 233 aa28.2■■■□□ 2.1
MRPL28-205ENST00000447696 DDX11Q96FC9 970 aa28.2■■■□□ 2.1
MRPL28-205ENST00000447696 COL6A3P12111 3177 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 B4E1Z4 1266 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 SNHG28P0DPA3 235 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 PDHBP11177 359 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 SLC4A3P48751 1232 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 ANKS1AQ92625 1134 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 TINF2Q9BSI4 451 aa28.19■■■□□ 2.1
MRPL28-205ENST00000447696 SEPT4O43236 478 aa28.18■■■□□ 2.1
MRPL28-205ENST00000447696 ZSCAN10Q96SZ4 725 aaPredicted RBP28.18■■■□□ 2.1
MRPL28-205ENST00000447696 C11orf49Q9H6J7 331 aa28.18■■■□□ 2.1
MRPL28-205ENST00000447696 ACAD9Q9H845 621 aa28.18■■■□□ 2.1
MRPL28-205ENST00000447696 U3KPZ7 1027 aaPredicted RBP28.18■■■□□ 2.1
MRPL28-205ENST00000447696 PLXNA1Q9UIW2 1896 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 ZNF543Q08ER8 600 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 LRIT3Q3SXY7 679 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 SYDE2Q5VT97 1194 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 ZNF467Q7Z7K2 595 aaPredicted RBP28.17■■■□□ 2.1
MRPL28-205ENST00000447696 ANKRD35Q8N283 1001 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 AGBL1Q96MI9 1066 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 ZKSCAN3Q9BRR0 538 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 RANBP17Q9H2T7 1088 aaKnown RBP28.17■■■□□ 2.1
MRPL28-205ENST00000447696 ZSWIM5Q9P217 1185 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 FRMPD3Q5JV73 1810 aa28.17■■■□□ 2.1
MRPL28-205ENST00000447696 PTH1RQ03431 593 aa28.16■■■□□ 2.1
MRPL28-205ENST00000447696 TTBK2Q6IQ55 1244 aa28.16■■■□□ 2.1
MRPL28-205ENST00000447696 RNF146Q9NTX7 359 aa28.16■■■□□ 2.1
MRPL28-205ENST00000447696 FRMPD2Q68DX3 1309 aaPredicted RBP28.16■■■□□ 2.1
MRPL28-205ENST00000447696 SYNGAP1Q96PV0 1343 aa28.16■■■□□ 2.1
MRPL28-205ENST00000447696 COL6A1P12109 1028 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 GPATCH4Q5T3I0 446 aaKnown RBP28.15■■■□□ 2.1
MRPL28-205ENST00000447696 CCDC174Q6PII3 467 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 MAMDC4Q6UXC1 1216 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 C7orf61Q8IZ16 206 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 DEFB123Q8N688 67 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 ENAHQ8N8S7 591 aaPredicted RBP28.15■■■□□ 2.1
MRPL28-205ENST00000447696 UBAC1Q9BSL1 405 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 GPCPD1Q9NPB8 672 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 HOMER2Q9NSB8 354 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 PNMA2Q9UL42 364 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 STXBP5LQ9Y2K9 1186 aa28.15■■■□□ 2.1
MRPL28-205ENST00000447696 ICAM1P05362 532 aa28.14■■■□□ 2.1
MRPL28-205ENST00000447696 SLC16A2P36021 539 aa28.14■■■□□ 2.1
MRPL28-205ENST00000447696 BMP2KLQ5H9B9 411 aa28.14■■■□□ 2.1
MRPL28-205ENST00000447696 PNMA1Q8ND90 353 aa28.14■■■□□ 2.1
MRPL28-205ENST00000447696 KAT14Q9H8E8 782 aa28.14■■■□□ 2.1
MRPL28-205ENST00000447696 TNKSO95271 1327 aa28.14■■■□□ 2.09
MRPL28-205ENST00000447696 CYP21A2P08686 494 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 TRDNQ13061 729 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 PRAMEF19Q5SWL8 479 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 MAP4K1Q92918 833 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 TRERF1Q96PN7 1200 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 CCPG1Q9ULG6 757 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 CNPY2Q9Y2B0 182 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 PFASO15067 1338 aa28.13■■■□□ 2.09
MRPL28-205ENST00000447696 ALAS1P13196 640 aa28.12■■■□□ 2.09
MRPL28-205ENST00000447696 SNAP25P60880 206 aa28.12■■■□□ 2.09
MRPL28-205ENST00000447696 A1CFQ9NQ94 594 aaKnown RBP28.12■■■□□ 2.09
MRPL28-205ENST00000447696 DNM1LO00429 736 aa28.11■■■□□ 2.09
MRPL28-205ENST00000447696 TDHQ8IZJ6 230 aa28.11■■■□□ 2.09
MRPL28-205ENST00000447696 ARRDC4Q8NCT1 418 aa28.11■■■□□ 2.09
MRPL28-205ENST00000447696 ZMYND8Q9ULU4 1186 aaPredicted RBP28.11■■■□□ 2.09
MRPL28-205ENST00000447696 ZNF865P0CJ78 1059 aaPredicted RBP28.1■■■□□ 2.09
MRPL28-205ENST00000447696 FAM133AQ8N9E0 248 aa28.1■■■□□ 2.09
MRPL28-205ENST00000447696 FGD4Q96M96 766 aa28.1■■■□□ 2.09
MRPL28-205ENST00000447696 POTEB2H3BUK9 544 aa28.09■■■□□ 2.09
MRPL28-205ENST00000447696 ASPRV1Q53RT3 343 aa28.09■■■□□ 2.09
MRPL28-205ENST00000447696 KIAA1211Q6ZU35 1233 aa28.09■■■□□ 2.09
MRPL28-205ENST00000447696 WDR19Q8NEZ3 1342 aa28.09■■■□□ 2.09
MRPL28-205ENST00000447696 SNAI1O95863 264 aaPredicted RBP28.08■■■□□ 2.09
MRPL28-205ENST00000447696 AKR1A1P14550 325 aa28.08■■■□□ 2.09
MRPL28-205ENST00000447696 TAL1P17542 331 aaPredicted RBP28.08■■■□□ 2.09
MRPL28-205ENST00000447696 SEC23AQ15436 765 aa28.08■■■□□ 2.09
MRPL28-205ENST00000447696 IFIT1BQ5T764 474 aaKnown RBP28.08■■■□□ 2.09
MRPL28-205ENST00000447696 CCDC136Q96JN2 1154 aa28.08■■■□□ 2.09
MRPL28-205ENST00000447696 ESYT1Q9BSJ8 1104 aa28.08■■■□□ 2.09
MRPL28-205ENST00000447696 RARBP10826 455 aa28.07■■■□□ 2.08
MRPL28-205ENST00000447696 MAGEA10P43363 369 aaPredicted RBP28.07■■■□□ 2.08
MRPL28-205ENST00000447696 MUM1L1Q5H9M0 696 aa28.07■■■□□ 2.08
MRPL28-205ENST00000447696 CYB5R4Q7L1T6 521 aa28.07■■■□□ 2.08
MRPL28-205ENST00000447696 RALYLQ86SE5 291 aaKnown RBP28.07■■■□□ 2.08
MRPL28-205ENST00000447696 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.07■■■□□ 2.08
MRPL28-205ENST00000447696 CYP39A1Q9NYL5 469 aa28.07■■■□□ 2.08
MRPL28-205ENST00000447696 RBM8AQ9Y5S9 174 aaKnown RBP28.07■■■□□ 2.08
MRPL28-205ENST00000447696 ALPK3Q96L96 1907 aa28.07■■■□□ 2.08
MRPL28-205ENST00000447696 E7EWF7 191 aa28.06■■■□□ 2.08
MRPL28-205ENST00000447696 GOLGA8HP0CJ92 632 aa28.06■■■□□ 2.08
MRPL28-205ENST00000447696 CNTN2Q02246 1040 aa28.06■■■□□ 2.08
MRPL28-205ENST00000447696 ANO1Q5XXA6 986 aa28.06■■■□□ 2.08
MRPL28-205ENST00000447696 NCOA7Q8NI08 942 aa28.06■■■□□ 2.08
MRPL28-205ENST00000447696 UBE2OQ9C0C9 1292 aaKnown RBP28.06■■■□□ 2.08
MRPL28-205ENST00000447696 MTMR10Q9NXD2 777 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms