RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 RIPK3Q9Y572 518 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 ZNF236Q9UL36 1845 aa15.45■□□□□ 0.06
HLA-DOB-207ENST00000447394 ZBED4O75132 1171 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CD2BP2O95400 341 aaKnown RBP15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CALM1P0DP23 149 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CALM2P0DP24 149 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CALM3P0DP25 149 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 METAP2P50579 478 aaKnown RBP eCLIP15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CDC37Q16543 378 aaPredicted RBP15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 RTN1Q16799 776 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 WDR78Q5VTH9 848 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 SYNE3Q6ZMZ3 975 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 TMTC3Q6ZXV5 915 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 HOMER1Q86YM7 354 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 MB21D1Q8N884 522 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 FANCBQ8NB91 859 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 GTF3C2Q8WUA4 911 aaPredicted RBP15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 PIGSQ96S52 555 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 HOMER2Q9NSB8 354 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CTDP1Q9Y5B0 961 aaPredicted RBP15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 NID2Q14112 1375 aa15.44■□□□□ 0.06
HLA-DOB-207ENST00000447394 CNTNAP5Q8WYK1 1306 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 PPP1R11O60927 126 aaPredicted RBP15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 ERCC3P19447 782 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 ADD1P35611 737 aaKnown RBP15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 PSMC4P43686 418 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 EVCP57679 992 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 USH1GQ495M9 461 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 NOM1Q5C9Z4 860 aaKnown RBP15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 NCAPG2Q86XI2 1143 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 MAP3K14Q99558 947 aa15.43■□□□□ 0.06
HLA-DOB-207ENST00000447394 TNPO2O14787 897 aaKnown RBP15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 FMNL1O95466 1100 aaPredicted RBP15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 KIF5BP33176 963 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 STAT3P40763 770 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 RABEP1Q15276 862 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 MUM1L1Q5H9M0 696 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 RIOX2Q8IUF8 465 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 NECAB1Q8N987 351 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 ERO1AQ96HE7 468 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 TEX13BQ9BXU2 312 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 GABRQQ9UN88 632 aa15.42■□□□□ 0.06
HLA-DOB-207ENST00000447394 ICAM1P05362 532 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 ALAS1P13196 640 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 FUT2Q10981 343 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 ST3GAL1Q11201 340 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 ME3Q16798 604 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 OTOP1Q7RTM1 612 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 GPR142Q7Z601 462 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 MCM3APO60318 1980 aa15.41■□□□□ 0.06
HLA-DOB-207ENST00000447394 ATP2A1O14983 1001 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 FCGRTP55899 365 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 PRKCZQ05513 592 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 SCRN1Q12765 414 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 KIF22Q14807 665 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 PHKBQ93100 1093 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 MTMR8Q96EF0 704 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 ZNF274Q96GC6 653 aaPredicted RBP15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 RNF146Q9NTX7 359 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 RBM28Q9NW13 759 aaKnown RBP15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
HLA-DOB-207ENST00000447394 HTTP42858 3142 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 NFIBO00712 420 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 ZBTB5O15062 677 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 MAPK4P31152 587 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 RCAN1P53805 252 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 OAZ1P54368 228 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 CCNA1P78396 465 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 ANKRD1Q15327 319 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 PLEKHH3Q7Z736 793 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 CCAR1Q8IX12 1150 aaKnown RBP15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 SHCBP1Q8NEM2 672 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 COA7Q96BR5 231 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 TRERF1Q96PN7 1200 aa15.39■□□□□ 0.05
HLA-DOB-207ENST00000447394 PFKFB2O60825 505 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 PGK2P07205 417 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 FDX1P10109 184 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 GNAQP50148 359 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 NTRK3Q16288 839 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 FBXO11Q86XK2 927 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 CLEC4DQ8WXI8 215 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 GPKOWQ92917 476 aaPredicted RBP eCLIP15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 SLKQ9H2G2 1235 aaPredicted RBP15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 PRDM10Q9NQV6 1147 aa15.38■□□□□ 0.05
HLA-DOB-207ENST00000447394 PNMA6FA0A0J9YX94 578 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 SLC25A27O95847 323 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 PTPREP23469 700 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 FLT3LGP49771 235 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 MORN1Q5T089 497 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms