RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 FGRP09769 529 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 FDX1P10109 184 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 HSPD1P10809 573 aaKnown RBP21.54■■□□□ 1.04
COL9A1-205ENST00000447041 SNAP25P60880 206 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 ZNF467Q7Z7K2 595 aaPredicted RBP21.54■■□□□ 1.04
COL9A1-205ENST00000447041 EXOC6Q8TAG9 804 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 CHURC1Q8WUH1 139 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 RILPL2Q969X0 211 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 AGBL1Q96MI9 1066 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 LBHD1Q9BQE6 289 aaPredicted RBP21.54■■□□□ 1.04
COL9A1-205ENST00000447041 RWDD1Q9H446 243 aaPredicted RBP21.54■■□□□ 1.04
COL9A1-205ENST00000447041 TOMM22Q9NS69 142 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 CCDC171Q6TFL3 1326 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 LRRC37A2A6NM11 1700 aa21.53■■□□□ 1.04
COL9A1-205ENST00000447041 NOVP48745 357 aa21.53■■□□□ 1.04
COL9A1-205ENST00000447041 RRP12Q5JTH9 1297 aaKnown RBP21.53■■□□□ 1.04
COL9A1-205ENST00000447041 ACAD9Q9H845 621 aa21.53■■□□□ 1.04
COL9A1-205ENST00000447041 PDLIM7Q9NR12 457 aa21.53■■□□□ 1.04
COL9A1-205ENST00000447041 RNF146Q9NTX7 359 aa21.53■■□□□ 1.04
COL9A1-205ENST00000447041 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.53■■□□□ 1.04
COL9A1-205ENST00000447041 ZMYM6O95789 1325 aa21.53■■□□□ 1.04
COL9A1-205ENST00000447041 A0A1W2PQ45 241 aaPredicted RBP21.52■■□□□ 1.04
COL9A1-205ENST00000447041 A0A1W2PQY0 241 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 ADCY6O43306 1168 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 PLA2G6O60733 806 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 HAND2P61296 217 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 RCSD1Q6JBY9 416 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 CCDC174Q6PII3 467 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 Q7L0L9 218 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 SH3RF1Q7Z6J0 888 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 CHD1LQ86WJ1 897 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 FAM184BQ9ULE4 1060 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 PRR12Q9ULL5 1215 aa21.52■■□□□ 1.04
COL9A1-205ENST00000447041 MYADML2A6NDP7 307 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 CNTN2Q02246 1040 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 NUCB1Q02818 461 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 ACVR2BQ13705 512 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 CCDC96Q2M329 555 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 ARMCX2Q7L311 632 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 TICAM2Q86XR7 235 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 PLEKHM2Q8IWE5 1019 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 A1CFQ9NQ94 594 aaKnown RBP21.51■■□□□ 1.03
COL9A1-205ENST00000447041 LCTP09848 1927 aa21.51■■□□□ 1.03
COL9A1-205ENST00000447041 LAMA4Q16363 1823 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 ALAS1P13196 640 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 IRX5P78411 483 aaPredicted RBP21.5■■□□□ 1.03
COL9A1-205ENST00000447041 TLE2Q04725 743 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 GPR153Q6NV75 609 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 CCDC144CPQ8IYA2 1237 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 FAM133AQ8N9E0 248 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 TRERF1Q96PN7 1200 aa21.5■■□□□ 1.03
COL9A1-205ENST00000447041 TRIM43BA6NCK2 446 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 POTEB2H3BUK9 544 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 SDSP20132 328 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 CCDC144BQ3MJ40 725 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 TTBK2Q6IQ55 1244 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 TBC1D10CQ8IV04 446 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 DEFB123Q8N688 67 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 KLHDC9Q8NEP7 349 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 DCAF4Q8WV16 495 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 BADQ92934 168 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 TRIM43Q96BQ3 446 aaPredicted RBP21.49■■□□□ 1.03
COL9A1-205ENST00000447041 TMEM47Q9BQJ4 181 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 KATNBL1Q9H079 304 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 ABHD16BQ9H3Z7 469 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 OSBPL3Q9H4L5 887 aa21.49■■□□□ 1.03
COL9A1-205ENST00000447041 SOWAHBA6NEL2 793 aa21.48■■□□□ 1.03
COL9A1-205ENST00000447041 DUSP11O75319 330 aaKnown RBP21.48■■□□□ 1.03
COL9A1-205ENST00000447041 SLC16A2P36021 539 aa21.48■■□□□ 1.03
COL9A1-205ENST00000447041 ACLYP53396 1101 aa21.48■■□□□ 1.03
COL9A1-205ENST00000447041 TKFCQ3LXA3 575 aa21.48■■□□□ 1.03
COL9A1-205ENST00000447041 CCSAPQ6IQ19 270 aaPredicted RBP21.48■■□□□ 1.03
COL9A1-205ENST00000447041 TSEN34Q9BSV6 310 aaKnown RBP21.48■■□□□ 1.03
COL9A1-205ENST00000447041 DDX49Q9Y6V7 483 aaKnown RBP21.48■■□□□ 1.03
COL9A1-205ENST00000447041 ASTN1O14525 1302 aa21.48■■□□□ 1.03
COL9A1-205ENST00000447041 FRMPD2Q68DX3 1309 aaPredicted RBP21.48■■□□□ 1.03
COL9A1-205ENST00000447041 COL6A3P12111 3177 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 PQBP1O60828 265 aaKnown RBP21.47■■□□□ 1.03
COL9A1-205ENST00000447041 TOP1P11387 765 aaKnown RBP21.47■■□□□ 1.03
COL9A1-205ENST00000447041 KCNA10Q16322 511 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 AKNAD1Q5T1N1 836 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 RANBP17Q9H2T7 1088 aaKnown RBP21.47■■□□□ 1.03
COL9A1-205ENST00000447041 STARD7Q9NQZ5 370 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 TCP11L1Q9NUJ3 509 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 CCPG1Q9ULG6 757 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 NEDD4P46934 1319 aa21.47■■□□□ 1.03
COL9A1-205ENST00000447041 MOXD2PA6NHM9 499 aa21.46■■□□□ 1.03
COL9A1-205ENST00000447041 CLTBP09497 229 aa21.46■■□□□ 1.03
COL9A1-205ENST00000447041 C6orf222P0C671 652 aaPredicted RBP21.46■■□□□ 1.03
COL9A1-205ENST00000447041 ITGB8P26012 769 aa21.46■■□□□ 1.03
COL9A1-205ENST00000447041 C9orf50Q5SZB4 431 aa21.46■■□□□ 1.03
COL9A1-205ENST00000447041 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.45■■□□□ 1.02
COL9A1-205ENST00000447041 ICAM1P05362 532 aa21.45■■□□□ 1.02
COL9A1-205ENST00000447041 CST5P28325 142 aaPredicted RBP21.45■■□□□ 1.02
COL9A1-205ENST00000447041 MFAP1P55081 439 aaKnown RBP21.45■■□□□ 1.02
COL9A1-205ENST00000447041 SYDE2Q5VT97 1194 aa21.45■■□□□ 1.02
COL9A1-205ENST00000447041 CWC27Q6UX04 472 aaKnown RBP21.45■■□□□ 1.02
COL9A1-205ENST00000447041 BTNL9Q6UXG8 535 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms