RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PIDD1Q9HB75 910 aa10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
SMARCE1-206ENST00000447024 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 CD8BP10966 210 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 FUT4P22083 530 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 ITPK1Q13572 414 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 U3KQE9 123 aa10.22□□□□□ -0.77
SMARCE1-206ENST00000447024 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 NDUFB5O43674 189 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 ZNF862O60290 1169 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 SERPINB4P48594 390 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 ZNF157P51786 506 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 ID3Q02535 119 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 FAAP100Q0VG06 881 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 RPS26P11Q5JNZ5 115 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 IL17REQ8NFR9 667 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 PHACTR3Q96KR7 559 aa10.21□□□□□ -0.77
SMARCE1-206ENST00000447024 COL5A3P25940 1745 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 ARHGAP4P98171 946 aa10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 ZNF790Q6PG37 636 aa10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 SMYD4Q8IYR2 804 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 NLGN1Q8N2Q7 840 aa10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 GLIS3Q8NEA6 775 aa10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 PRKRIP1Q9H875 184 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 RC3H2Q9HBD1 1191 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 PCDHGC5Q9Y5F6 944 aa10.2□□□□□ -0.78
SMARCE1-206ENST00000447024 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 STARD3NLO95772 234 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 RNASE1P07998 156 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 SLFN14P0C7P3 912 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 CRKLP46109 303 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 ATG4DQ86TL0 474 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 PNISRQ8TF01 805 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 CCDC74AQ96AQ1 378 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 SYT17Q9BSW7 474 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 DISC1Q9NRI5 854 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 ADAMTS6Q9UKP5 1117 aa10.19□□□□□ -0.78
SMARCE1-206ENST00000447024 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 MYH14Q7Z406 1995 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 GADD45BO75293 160 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 CYP19A1P11511 503 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 RFC4P35249 363 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 CD96P40200 585 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 TTLL4Q14679 1199 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 MBNL3Q9NUK0 354 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 VAV3Q9UKW4 847 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 CD2APQ9Y5K6 639 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 SIPA1L3O60292 1781 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 UBR2Q8IWV8 1755 aa10.18□□□□□ -0.78
SMARCE1-206ENST00000447024 KCPQ6ZWJ8 1503 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 EIF1AYO14602 144 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 LEFTY1O75610 366 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 GSTP1P09211 210 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 PRKCQQ04759 706 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 LMOD3Q0VAK6 560 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 TAF7Q15545 349 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 ZNF124Q15973 351 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 FAM168AQ92567 244 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 KRT82Q9NSB4 513 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
SMARCE1-206ENST00000447024 HEG1Q9ULI3 1381 aa10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 A0A087WZG4 1122 aa10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 GPR182O15218 404 aa10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 HCLS1P14317 486 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 WDR43Q15061 677 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 IFI16Q16666 785 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 DNAJC10Q8IXB1 793 aa10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 DNAJC25Q9H1X3 360 aa10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 TJP1Q07157 1748 aa10.16□□□□□ -0.78
SMARCE1-206ENST00000447024 RNGTTO60942 597 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 GRM2Q14416 872 aa10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 AMIGO3Q86WK7 504 aa10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 LRRN4CLQ8ND94 238 aa10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 ZNF496Q96IT1 587 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 MKNK2Q9HBH9 465 aa10.15□□□□□ -0.78
SMARCE1-206ENST00000447024 SOS1Q07889 1333 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 USP42Q9H9J4 1324 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 IGHA2P01877 340 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 CEACAM5P06731 702 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 SNRPA1P09661 255 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 GYS1P13807 737 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 OXCT1P55809 520 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 HNRNPUQ00839 825 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 PI4K2BQ8TCG2 481 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 RUNDC1Q96C34 613 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 DUSP23Q9BVJ7 150 aa10.14□□□□□ -0.79
SMARCE1-206ENST00000447024 FARP2O94887 1054 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 MMP10P09238 476 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 IL6STP40189 918 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 AOC3Q16853 763 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms