RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 CPXCR1Q8N123 301 aa13.93□□□□□ -0.18
FLOT1-206ENST00000445853 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
FLOT1-206ENST00000445853 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
FLOT1-206ENST00000445853 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
FLOT1-206ENST00000445853 MAP3K20Q9NYL2 800 aaKnown RBP13.93□□□□□ -0.18
FLOT1-206ENST00000445853 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
FLOT1-206ENST00000445853 CCDC196A0A1B0GTZ2 297 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 PALM3A6NDB9 673 aaPredicted RBP13.92□□□□□ -0.18
FLOT1-206ENST00000445853 B4DLN1 442 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 GJB1P08034 283 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 CYP2B6P20813 491 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
FLOT1-206ENST00000445853 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 USP26Q9BXU7 913 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 TM6SF1Q9BZW5 370 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 HMX1Q9NP08 348 aaPredicted RBP13.92□□□□□ -0.18
FLOT1-206ENST00000445853 CCPG1Q9ULG6 757 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
FLOT1-206ENST00000445853 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
FLOT1-206ENST00000445853 INHAP05111 366 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 FGD1P98174 961 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
FLOT1-206ENST00000445853 GRM4Q14833 912 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 MAP3K21Q5TCX8 1036 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 BLOC1S2Q6QNY1 142 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 MCF2L2Q86YR7 1114 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 LY9Q9HBG7 655 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 RAVER2Q9HCJ3 691 aaKnown RBP13.91□□□□□ -0.18
FLOT1-206ENST00000445853 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
FLOT1-206ENST00000445853 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 GJA8P48165 433 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 ANTXR2P58335 489 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 MAMDC4Q6UXC1 1216 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 RNF208Q9H0X6 261 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 RIOX1Q9H6W3 641 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
FLOT1-206ENST00000445853 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
FLOT1-206ENST00000445853 ADD3Q9UEY8 706 aaKnown RBP13.9□□□□□ -0.18
FLOT1-206ENST00000445853 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
FLOT1-206ENST00000445853 MRPL11Q9Y3B7 192 aaKnown RBP13.9□□□□□ -0.18
FLOT1-206ENST00000445853 ZNF536O15090 1300 aa13.9□□□□□ -0.19
FLOT1-206ENST00000445853 ABCB11O95342 1321 aa13.9□□□□□ -0.19
FLOT1-206ENST00000445853 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
FLOT1-206ENST00000445853 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.19
FLOT1-206ENST00000445853 ASB14A6NK59 587 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 ZBTB5O15062 677 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
FLOT1-206ENST00000445853 IGHA2P01877 340 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 CCL5P13501 91 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 SLC16A2P36021 539 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 ZNF792Q3KQV3 632 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 TTBK2Q6IQ55 1244 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 ADGRF4Q8IZF3 695 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 ANKLE1Q8NAG6 615 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 TRIB2Q92519 343 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 SPZ1Q9BXG8 430 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
FLOT1-206ENST00000445853 A0A0G2JMZ2 1700 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 ALAS1P13196 640 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 ELNP15502 786 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
FLOT1-206ENST00000445853 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 FBXO11Q86XK2 927 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 FANCBQ8NB91 859 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 TINF2Q9BSI4 451 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 RBM27Q9P2N5 1060 aaKnown RBP13.88□□□□□ -0.19
FLOT1-206ENST00000445853 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 CYP46A1Q9Y6A2 500 aa13.88□□□□□ -0.19
FLOT1-206ENST00000445853 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 PEX10O60683 326 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 COBLO75128 1261 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
FLOT1-206ENST00000445853 SGPL1O95470 568 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 GOLGA8HP0CJ92 632 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
FLOT1-206ENST00000445853 ANKRD1Q15327 319 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 RUFY3Q7L099 469 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 CHST3Q7LGC8 479 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 CHMP4CQ96CF2 233 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
FLOT1-206ENST00000445853 IL17RAQ96F46 866 aa13.87□□□□□ -0.19
FLOT1-206ENST00000445853 JAKMIP1Q96N16 626 aaKnown RBP13.87□□□□□ -0.19
FLOT1-206ENST00000445853 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.87□□□□□ -0.192e-7■■■■□ 25.8
FLOT1-206ENST00000445853 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms