RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ZBED2Q9BTP6 218 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 LSM14BQ9BX40 385 aaKnown RBP8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 CLEC1BQ9P126 229 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 WNT16Q9UBV4 365 aa8.23□□□□□ -1.09
BRAFP1-201ENST00000445336 ZNFX1Q9P2E3 1918 aaKnown RBP8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 CACNA1FO60840 1977 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 CEP250Q9BV73 2442 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 HMGCS2P54868 508 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 C1orf210Q8IVY1 113 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 RETREG2Q8NC44 543 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 OSBPL6Q9BZF3 934 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 KCNK4Q9NYG8 393 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 DCHS1Q96JQ0 3298 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 ASGR1P07306 291 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 SPP2Q13103 211 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 PRR23CQ6ZRP0 262 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 FAM43BQ6ZT52 329 aaPredicted RBP8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 ATP8B4Q8TF62 1192 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 WBP1Q96G27 269 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 DKK4Q9UBT3 224 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 USTQ9Y2C2 406 aa8.22□□□□□ -1.09
BRAFP1-201ENST00000445336 DENND4AQ7Z401 1863 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 C1QL1O75973 258 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 KCNK5O95279 499 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 PGK1P00558 417 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 HOXB8P17481 243 aaPredicted RBP8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 MAMDC4Q6UXC1 1216 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 TTLL11Q8NHH1 800 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 CRBNQ96SW2 442 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 PARD6AQ9NPB6 346 aa8.21□□□□□ -1.09
BRAFP1-201ENST00000445336 SCN5AQ14524 2016 aa8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 NDUFV1P49821 464 aa8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 TMEM192Q8IY95 271 aa8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 P2RX5Q93086 422 aa8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 BBC3Q96PG8 261 aaPredicted RBP8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 DLGAP2Q9P1A6 1054 aa8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 FAM198AQ9UFP1 575 aa8.21□□□□□ -1.1
BRAFP1-201ENST00000445336 GREB1Q4ZG55 1949 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 KLRK1P26718 216 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 CCL23P55773 120 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 CELF5Q8N6W0 485 aaKnown RBP8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 CAGE1Q8TC20 777 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 AFAP1L1Q8TED9 768 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 TINF2Q9BSI4 451 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 DUSP12Q9UNI6 340 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 BRD1O95696 1058 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 IQCF3P0C7M6 154 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 MAMSTRQ6ZN01 415 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
BRAFP1-201ENST00000445336 UMODL1Q5DID0 1318 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 SLC25A27O95847 323 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 GP1BBP13224 206 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 CHRNDQ07001 517 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 DLX2Q07687 328 aaPredicted RBP8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 ITGA7Q13683 1181 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 USP34Q70CQ2 3546 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 MICAL3Q7RTP6 2002 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 CAPN9O14815 690 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 CAP2P40123 477 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 PPARGC1BQ86YN6 1023 aaKnown RBP8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 SLF2Q8IX21 1173 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 HERC5Q9UII4 1024 aaKnown RBP8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 CNPY2Q9Y2B0 182 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
BRAFP1-201ENST00000445336 SMPD1P17405 629 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 RSPO2Q6UXX9 243 aaPredicted RBP8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 RAB23Q9ULC3 237 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 COBLO75128 1261 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 WISP1O95388 367 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 PLCD1P51178 756 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 USP14P54578 494 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 ZNF792Q3KQV3 632 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 CATSPERGQ6ZRH7 1159 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 ATRIPQ8WXE1 791 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 CWC25Q9NXE8 425 aaPredicted RBP8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 REV3LO60673 3130 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 SALL3Q9BXA9 1300 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 DLG5Q8TDM6 1919 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 MYH13Q9UKX3 1938 aa8.18□□□□□ -1.1
BRAFP1-201ENST00000445336 H0Y626 953 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 B4GALT4O60513 344 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 TRIM16O95361 564 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 ASNSP08243 561 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 CSRP1P21291 193 aaKnown RBP8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 NRLP54845 237 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 COL28A1Q2UY09 1125 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 CDC42EP5Q6NZY7 148 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 C17orf80Q9BSJ5 609 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 HYPKQ9NX55 129 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 USP17L10C9JJH3 530 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 AMHP03971 560 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 HIBADHP31937 336 aaKnown RBP8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 TROAPQ12815 778 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 LOXL4Q96JB6 756 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
BRAFP1-201ENST00000445336 S1PR5Q9H228 398 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms